Evidence map›Paper›PMID 29855673›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2018

Rht23 (5Dq') likely encodes a Q homeologue with pleiotropic effects on plant height and spike compactness.

Kaijun Zhao, Jin Xiao, Yu Liu, Shulin Chen, Chunxia Yuan, Aizhong Cao, Frank M You, Donglei Yang, Shengmin An, Haiyan Wang and 1 more

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 50 citations in OpenAlex.

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  8. Joint linkage and association analysis identifies genomic regions and candidate genes for yield-related traits in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  9. Identification of a novel dwarfing gene,Molecular breeding : new strategies in plant improvement · 2025
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  11. Testing the potential of zebularine to induce heritable changes in crop growth and development.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  12. Article
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  14. Natural variant of Rht27, a dwarfing gene, enhances yield potential in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  15. Cloning a novel reduced-height (Frontiers in plant science · 2024
    Article
  16. Article
  17. Dissection and validation of a promising QTL controlling spikelet number on 5B in bread wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Kaijun ZhaoState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China.
Jin XiaoState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China.
Yu LiuState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China.
Shulin ChenCollege of Agronomy, Henan Agricultural University/Collaborative Innovation Center of Henan Grain Crops, Zhengzhou, 450002, China.
Chunxia YuanState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China.
Aizhong CaoState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China.
Frank M YouMorden Research and Development Centre, Agriculture and Agri-Food Canada, Morden, MB, R6M 1Y5, Canada.
Donglei YangState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China.
Shengmin AnState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China.
Haiyan WangState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China. hywang@njau.edu.cn.
Xiue WangState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, 210095, China. xiuew@njau.edu.cn.
Nanjing Agricultural University · CNAgriculture and Agri-Food Canada · CAHenan Agricultural University · CN

Funding

International Cooperation and Exchange of the National Natural Science Foundation of China 31661143005Jiangsu Agricultural Science and Technology Innovation Fund CX151001National Key Research and Development Program 2016YFD0100302)the Fundamental Research Funds for the Central Universities KYZ201403the Program of Introducing Talents of Discipline to Universities B08025the Science and Technology Service Programs of Chinese Academy of Sciences KFJ-STS-ZDTP-002the Technology Support Program of Jiangsu Province BE2013439
6 · The paper itself

Abstract

The domesticated gene Q on wheat chromosome 5A (5AQ) encodes an AP2 transcription factor. The 5AQ was originated from a G to A mutation in exon 8 and/or C to T transition in exon 10 and resulted in free-threshing and subcompact spike characters of bread wheat. The Q homeoalleles on 5B and 5D are either a pseudogene or expressed at a low level. Our previous study identified a mutant, named NAUH164, by EMS treatment of wheat variety Sumai 3. The mutant exhibits compact spike and dwarfness, and the mutated locus Rht23 was mapped to the distal of the long arm of chromosome 5D, where 5Dq was located. To investigate the relationship of Rht23 and 5Dq, sequences and expression patterns of 5Dq from Sumai 3 and NAUH164 were compared. The two genotypes had a G3147A single nucleotide polymorphism (SNP), which was predicted to be located within the miR172 binding site of 5Dq. Based on this SNP, an SNP marker was developed and linkage analysis using a (NAUH164 × Alondra's) RIL population showed the marker was co-segregated with the Rht23 mutant traits. The qRT-PCR and Northern blot showed that in NAUH164, the expression of 5Dq was significantly up-regulated, and consistently, the expression of Ta-miR172 was down-regulated in leaves, stems and spikes. Our results demonstrated that point mutation in the miR172 binding site of the 5Dq likely increased its transcript level via a reduction in miRNA-dependent degradation, and this resulted in pleiotropic effects on spike compactness and plant dwarfness.

Indexed as

Genes, PlantChromosome MappingCloning, MolecularGene Expression Regulation, PlantGenetic LinkageGenetic MarkersGenetic PleiotropyGenotypeMicroRNAsPhenotypePoint MutationPolymorphism, Single NucleotideTranscription Factor AP-2TriticumGenetic MarkersMicroRNAsTranscription Factor AP-2

Identifiers

PMID29855673
OpenAlexW2805344205

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.