Evidence map›Paper›PMID 29855467›Full record

ArticleEmerging microbes & infections2018

Antigenic characterization of highly pathogenic avian influenza A(H5N1) viruses with chicken and ferret antisera reveals clade-dependent variation in hemagglutination inhibition profiles.

Diep Thi Nguyen, Samuel S Shepard, David Francis Burke, Joyce Jones, Sharmi Thor, Long Van Nguyen, Tho Dang Nguyen, Amanda Balish, Dang Nguyen Hoang, Thanh Long To and 6 more

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Diep Thi NguyenNational Center for Veterinary Diagnostics, Department of Animal Health, Hanoi, Vietnam. diep.dahvn@gmail.com.
Samuel S ShepardInfluenza Division, Centers for Disease Control and Prevention, Atlanta, GA, 30333, USA.
David Francis BurkeDepartment of Zoology, Cambridge University, Cambridge, UK.
Joyce JonesInfluenza Division, Centers for Disease Control and Prevention, Atlanta, GA, 30333, USA.
Sharmi ThorInfluenza Division, Centers for Disease Control and Prevention, Atlanta, GA, 30333, USA.ORCID http://orcid.org/0000-0002-0234-5403
Long Van NguyenDepartment of Animal Health, Ministry of Agriculture and Rural Development of Vietnam, Hanoi, Vietnam.
Tho Dang NguyenNational Center for Veterinary Diagnostics, Department of Animal Health, Hanoi, Vietnam.
Amanda BalishInfluenza Division, Centers for Disease Control and Prevention, Atlanta, GA, 30333, USA.
Dang Nguyen HoangNational Center for Veterinary Diagnostics, Department of Animal Health, Hanoi, Vietnam.
Thanh Long ToDepartment of Animal Health, Ministry of Agriculture and Rural Development of Vietnam, Hanoi, Vietnam.
Munir IqbalThe Pirbright Institute, Pirbright, UK.
David E WentworthInfluenza Division, Centers for Disease Control and Prevention, Atlanta, GA, 30333, USA.
Erica SpackmanUnited States Department of Agriculture, Southeast Poultry Research Laboratory, Athens, GA, USA.
H Rogier van DoornOxford University Clinical Research Unit, Hanoi, Vietnam.
C Todd DavisInfluenza Division, Centers for Disease Control and Prevention, Atlanta, GA, 30333, USA. eou8@cdc.gov.
Juliet E BryantOxford University Clinical Research Unit, Hanoi, Vietnam. juliet.bryant@fondation-merieux.org.
Centers for Disease Control and Prevention · USDepartment of Animal Health · VNUniversity of Oxford · GBThe Pirbright Institute · GBUnited States Department of Agriculture · USUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00001708Biotechnology and Biological Sciences Research Council BBS/E/I/00007031Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Biotechnology and Biological Sciences Research Council BBS/E/I/00007039NIAID NIH HHS HHSN272201400008C
6 · The paper itself

Abstract

Highly pathogenic avian influenza (HPAI) A(H5N1) viruses pose a significant economic burden to the poultry industry worldwide and have pandemic potential. Poultry vaccination against HPAI A(H5N1) viruses has been an important component of HPAI control measures and has been performed in Vietnam since 2005. To systematically assess antigenic matching of current vaccines to circulating field variants, we produced a panel of chicken and ferret antisera raised against historical and contemporary Vietnamese reference viruses representing clade variants that were detected between 2001 and 2014. The antisera were used for hemagglutination inhibition (HI) assays to generate data sets for analysis by antigenic cartography, allowing for a direct comparison of results from chicken or ferret antisera. HI antigenic maps, developed with antisera from both hosts, revealed varying patterns of antigenic relationships and clustering of viruses that were dependent on the clade of viruses analyzed. Antigenic relationships between existing poultry vaccines and circulating field viruses were also aligned with in vivo protection profiles determined by previously reported vaccine challenge studies. Our results establish the feasibility and utility of HPAI A(H5N1) antigenic characterization using chicken antisera and support further experimental and modeling studies to investigate quantitative relationships between genetic variation, antigenic drift and correlates of poultry vaccine protection in vivo.

Indexed as

Antigenic VariationAnimalsAntibodies, ViralChick EmbryoChickensFemaleFerretsHemagglutination Inhibition TestsHemagglutinin Glycoproteins, Influenza VirusImmune SeraInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsMalePhylogenyPoultry DiseasesSpecies SpecificityAntibodies, ViralHemagglutinin Glycoproteins, Influenza VirusImmune Sera

Identifiers

PMID29855467
PMCPMC5981457
OpenAlexW2807412224

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.