Evidence map›Paper›PMID 29854193›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2017

Extracting Healthcare Quality Information from Unstructured Data.

Shervin Malmasi, Naoshi Hosomura, Lee-Shing Chang, C Justin Brown, Stephen Skentzos, Alexander Turchin

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Robust privacy amidst innovation with large language models through a critical assessment of the risks.Journal of the American Medical Informatics Association : JAMIA · 2025
    Article
  7. Article
  8. Data Quality in Health Research: Integrative Literature Review.Journal of medical Internet research · 2023
    Review
  9. Dentistry and Interoperability.Journal of dental research · 2022
    Article
  10. Article
  11. The prediction of hospital length of stay using unstructured data.BMC medical informatics and decision making · 2021
    Observational
  12. Efficient goal attainment and engagement in a care manager system using unstructured notes.Journal of the American Medical Informatics Association : JAMIA · 2020
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shervin MalmasiBrigham and Women's Hospital, Boston, MA.
Naoshi HosomuraBrigham and Women's Hospital, Boston, MA.
Lee-Shing ChangBrigham and Women's Hospital, Boston, MA.
C Justin BrownBrigham and Women's Hospital, Boston, MA.
Stephen SkentzosKiip, Inc., San Francisco, CA.
Alexander TurchinBrigham and Women's Hospital, Boston, MA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Healthcare quality research is a fundamental task that involves assessing treatment patterns and measuring the associated patient outcomes to identify potential areas for improving healthcare. While both qualitative and quantitative approaches are used, a major obstacle for the quantitative approach is that many useful healthcare quality indicators are buried within provider narrative notes, requiring expensive and laborious manual chart review to identify and measure them. Information extraction is a key Natural Language Processing (NLP) task for discovering and mining critical knowledge buried in unstructured clinical data. Nevertheless, widespread adoption of NLP has yet to materialize; the technical skills required for the development or use of such software present a major barrier for medical researchers wishing to employ these methods. In this paper we introduce Canary, a free and open source solution designed for users without NLP and technical expertise and apply it to four tasks, aiming to measure the frequency of: (1) insulin decline; (2) statin medication decline; (3) adverse reactions to statins; and (3) bariatric surgery counselling. Our results demonstrate that this approach facilitates mining of unstructured data with high accuracy, enabling the extraction of actionable healthcare quality insights from free-text data sources.

Indexed as

Natural Language ProcessingQuality of Health CareBariatric SurgeryData MiningHumansHydroxymethylglutaryl-CoA Reductase InhibitorsHypoglycemic AgentsInsulinResearch PersonnelSoftwareTreatment RefusalHydroxymethylglutaryl-CoA Reductase InhibitorsHypoglycemic AgentsInsulin

Identifiers

PMID29854193
PMCPMC5977624

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.