Evidence map›Paper›PMID 29851333›Full record

ArticleACS chemical biology2018

Detection of Chemical Engagement of Solute Carrier Proteins by a Cellular Thermal Shift Assay.

Mari Hashimoto, Enrico Girardi, Ruth Eichner, Giulio Superti-Furga

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mari HashimotoCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences , 1090 Vienna , Austria.
Enrico GirardiCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences , 1090 Vienna , Austria.
Ruth EichnerCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences , 1090 Vienna , Austria.
Giulio Superti-FurgaCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences , 1090 Vienna , Austria.ORCID 0000-0002-0570-1768
Austrian Academy of Sciences · AT

Funding

Austrian Science Fund FWF P 29250
6 · The paper itself

Abstract

Solute carriers (SLCs) are transmembrane proteins that transport various nutrients, metabolites, and drugs across cellular membranes. Despite the relevance of SLCs to cell homeostasis, metabolism, and disease states, for the majority of SLCs we lack experimental evidence regarding the nature of the cognate ligands, whether endobiotic or xenobiotic. Moreover, even for the roughly 20 SLCs for which inhibitors have been characterized, engagement assays in cells are limited to the accessibility of radiolabeled or fluorescent probes. The cellular thermal shift assay (CETSA) has been introduced as a powerful method to assess target engagement by monitoring ligand-induced changes in the thermal stability of cellular proteins. We addressed the question of whether CETSA could be modified to become routinely applicable to membrane transporters such as SLCs. We used SLC16A1 (MCT1) and SLC1A2 (EAAT2) as targets to establish robust conditions by which chemical engagement of SLCs can be detected. Using immunoblotting, we demonstrate that treatment with the SLC16A1 inhibitors AZD3965 and AR-C155858 stabilized endogenous SLC16A1 in HEK293 cell lysates as well as intact cells. In addition, the high-affinity ligand of SLC16A1, l-lactate, and the low-affinity ligand, formate, resulted in strong and weak stabilization of SLC16A1, respectively. Moreover, we observed stabilization of SLC1A2 upon treatment with the selective inhibitor WAY-213613. We propose that the experimental approach presented here should be generally and easily applicable for monitoring the engagement of chemical ligands by SLCs in cellular settings and thus assisting in their deorphanization.

Indexed as

Biological AssayExcitatory Amino Acid Transporter 2FormatesGlutamate Plasma Membrane Transport ProteinsHEK293 CellsHot TemperatureHumansLactic AcidLigandsMonocarboxylic Acid TransportersProtein BindingProtein StabilityPyrimidinonesThiophenesUracilAR C155858AZD3965Excitatory Amino Acid Transporter 2Formatesformic acidGlutamate Plasma Membrane Transport ProteinsLactic AcidLigandsMonocarboxylic Acid TransportersPyrimidinonesSLC16A11 protein, humanSLC1A2 protein, humanThiophenesUracil

Identifiers

PMID29851333
PMCPMC6067815
OpenAlexW2805790013

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.