Evidence map›Paper›PMID 29848629›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Sequential activation of human signal recognition particle by the ribosome and signal sequence drives efficient protein targeting.

Jae Ho Lee, Sowmya Chandrasekar, SangYoon Chung, Yu-Hsien Hwang Fu, Demi Liu, Shimon Weiss, Shu-Ou Shan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Mechanism of Protein Translocation by the Sec61 Translocon Complex.Cold Spring Harbor perspectives in biology · 2023
    Review
  8. Review
  9. Targeting of Proteins for Translocation at the Endoplasmic Reticulum.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Fidelity of Cotranslational Protein Targeting to the Endoplasmic Reticulum.International journal of molecular sciences · 2021
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jae Ho LeeDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125.
Sowmya ChandrasekarDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125.
SangYoon ChungDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095.
Yu-Hsien Hwang FuDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0002-2861-4843
Demi LiuDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125.
Shimon WeissDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095.
Shu-Ou ShanDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125; sshan@caltech.edu.ORCID 0000-0002-6526-1733
California Institute of Technology · USBar-Ilan University · ILUniversity of California, Los Angeles · US

Funding

Molecular Mechanism of Protein Targeting by the Signal Recognition ParticleR01GM078024 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI SHAN, SHU-OU · 2007 to 2020
$4.4M
NIGMS NIH HHS R01 GM078024
6 · The paper itself

Abstract

Signal recognition particle (SRP) is a universally conserved targeting machine that mediates the targeted delivery of ∼30% of the proteome. The molecular mechanism by which eukaryotic SRP achieves efficient and selective protein targeting remains elusive. Here, we describe quantitative analyses of completely reconstituted human SRP (hSRP) and SRP receptor (SR). Enzymatic and fluorescence analyses showed that the ribosome, together with a functional signal sequence on the nascent polypeptide, are required to activate SRP for rapid recruitment of the SR, thereby delivering translating ribosomes to the endoplasmic reticulum. Single-molecule fluorescence spectroscopy combined with cross-complementation analyses reveal a sequential mechanism of activation whereby the ribosome unlocks the hSRP from an autoinhibited state and primes SRP to sample a variety of conformations. The signal sequence further preorganizes the mammalian SRP into the optimal conformation for efficient recruitment of the SR. Finally, the use of a signal sequence to activate SRP for receptor recruitment is a universally conserved feature to enable efficient and selective protein targeting, and the eukaryote-specific components confer upon the mammalian SRP the ability to sense and respond to ribosomes.

Indexed as

Endoplasmic ReticulumEscherichia coliHumansPeptidesProtein BindingProtein BiosynthesisProtein Sorting SignalsProtein TransportReceptors, Cytoplasmic and NuclearReceptors, PeptideRibosomesSignal Recognition ParticlePeptidesProtein Sorting SignalsReceptors, Cytoplasmic and NuclearReceptors, Peptidesignal peptide receptorSignal Recognition Particlefluorescence spectroscopyprotein targetingribosomesignal recognition particlesingle-molecule spectroscopy

Identifiers

PMID29848629
PMCPMC6004459
OpenAlexW2805902691

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.