Evidence map›Paper›PMID 29848619›Full record

ArticleThe Journal of cell biology2018

Atg9 establishes Atg2-dependent contact sites between the endoplasmic reticulum and phagophores.

Rubén Gómez-Sánchez, Jaqueline Rose, Rodrigo Guimarães, Muriel Mari, Daniel Papinski, Ester Rieter, Willie J Geerts, Ralph Hardenberg, Claudine Kraft, Christian Ungermann and 1 more

Abstract read
In one paragraph

Article in The Journal of cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 156 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
156citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

156 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Stay in touch with the endoplasmic reticulum.Science China. Life sciences · 2024
    Pooled it
  2. Guideline
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Functional Homology of WIPI4 and Atg18 EnablesInternational journal of molecular sciences · 2026
    Article
  10. bioRxiv : the preprint server for biology · 2026
    Article
  11. Review
  12. The Human Autophagy Core Complexes.Annual review of biochemistry · 2026
    Review
  13. Article
  14. Where and how do mammalian cells shape autophagosomes?The Journal of biological chemistry · 2026
    Review
  15. Article
  16. Core principles of autophagy initiation mechanisms.Nature structural & molecular biology · 2026
    Review
  17. Article
  18. Article
  19. Article
  20. Article

96 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Rubén Gómez-SánchezDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.ORCID 0000-0002-8274-3259
Jaqueline RoseDepartment of Biology/Chemistry, Biochemistry Section, University of Osnabrück, Osnabrück, Germany.
Rodrigo GuimarãesDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
Muriel MariDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
Daniel PapinskiMax F. Perutz Laboratories, University of Vienna, Vienna Biocenter, Vienna, Austria.
Ester RieterDepartment of Cell Biology, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands.
Willie J GeertsBiomolecular Imaging, Bijvoet Center, Utrecht University, Utrecht, Netherlands.
Ralph HardenbergDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
Claudine KraftMax F. Perutz Laboratories, University of Vienna, Vienna Biocenter, Vienna, Austria.ORCID 0000-0002-3324-4701
Christian UngermannDepartment of Biology/Chemistry, Biochemistry Section, University of Osnabrück, Osnabrück, Germany cu@uos.de.ORCID 0000-0003-4331-8695
Fulvio ReggioriDepartment of Cell Biology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands f.m.reggiori@umcg.nl.ORCID 0000-0003-2652-2686

Funding

Austrian Science Fund FWF P 25522Austrian Science Fund FWF P 28113HSRD VA HIR 10-001
6 · The paper itself

Abstract

The autophagy-related (Atg) proteins play a key role in the formation of autophagosomes, the hallmark of autophagy. The function of the cluster composed by Atg2, Atg18, and transmembrane Atg9 is completely unknown despite their importance in autophagy. In this study, we provide insights into the molecular role of these proteins by identifying and characterizing Atg2 point mutants impaired in Atg9 binding. We show that Atg2 associates to autophagosomal membranes through lipid binding and independently from Atg9. Its interaction with Atg9, however, is key for Atg2 confinement to the growing phagophore extremities and subsequent association of Atg18. Assembly of the Atg9-Atg2-Atg18 complex is important to establish phagophore-endoplasmic reticulum (ER) contact sites. In turn, disruption of the Atg2-Atg9 interaction leads to an aberrant topological distribution of both Atg2 and ER contact sites on forming phagophores, which severely impairs autophagy. Altogether, our data shed light in the interrelationship between Atg9, Atg2, and Atg18 and highlight the possible functional relevance of the phagophore-ER contact sites in phagophore expansion.

Indexed as

AutophagyAutophagy-Related ProteinsEndoplasmic ReticulumLipid MetabolismMembrane ProteinsPhosphatidylinositol PhosphatesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsATG18 protein, S cerevisiaeATG2 protein, S cerevisiaeATG9 protein, S cerevisiaeAutophagy-Related ProteinsMembrane Proteinsphosphatidylinositol 3-phosphatePhosphatidylinositol PhosphatesSaccharomyces cerevisiae Proteins

Identifiers

PMID29848619
PMCPMC6080931

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.