Evidence map›Paper›PMID 29848288›Full record

ArticleBMC plant biology2018

Comparative transcriptome analysis reveals the regulatory networks of cytokinin in promoting the floral feminization in the oil plant Sapium sebiferum.

Jun Ni, Faheem Afzal Shah, Wenbo Liu, Qiaojian Wang, Dongdong Wang, Weiwei Zhao, Weili Lu, Shengwei Huang, Songling Fu, Lifang Wu

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

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  11. Karrikin Improves Osmotic and Salt Stress ToleranceFrontiers in plant science · 2020
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  12. Overexpression of the Stress-InducibleInternational journal of molecular sciences · 2019
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  14. PeerJ · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jun NiKey laboratory of high magnetic field and Ion beam physical biology,Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui, 230031, China.
Faheem Afzal ShahSchool of Forestry and Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, China.
Wenbo LiuKey laboratory of high magnetic field and Ion beam physical biology,Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui, 230031, China.
Qiaojian WangSchool of Forestry and Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, China.
Dongdong WangSchool of Forestry and Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, China.
Weiwei ZhaoKey laboratory of high magnetic field and Ion beam physical biology,Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui, 230031, China.
Weili LuKey laboratory of high magnetic field and Ion beam physical biology,Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui, 230031, China.
Shengwei HuangKey laboratory of high magnetic field and Ion beam physical biology,Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui, 230031, China.
Songling FuSchool of Forestry and Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, China.
Lifang WuKey laboratory of high magnetic field and Ion beam physical biology,Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui, 230031, China. lfwu@ipp.ac.cn.
Anhui Agricultural University · CNHefei Institutes of Physical Science · CNChinese Academy of Sciences · CN

Funding

National Natural Science Foundation of China 31500531Natural Science Foundation of Anhui Province 1708085QC70the key program of 13th five-year plan No. kp-2017-21the President Foundation of Hefei Institutes of Physical Science of Chinese Academy of Sciences YZJJ201619the Science and Technology Service program of Chinese Academy of Sciences KFJ-STS-ZDTP-002
6 · The paper itself

Abstract

backgroundSapium sebiferum, whose seeds contain high level of fatty acids, has been considered as one of the most important oil plants. However, the high male to female flower ratio limited the seed yield improvement and its industrial potentials. Thus, the study of the sex determination in S. sebiferum is of significant importance in increasing the seed yield.

resultsIn this study, we demonstrated that in S. sebiferum, cytokinin (CK) had strong feminization effects on the floral development. Exogenous application with 6-benzylaminopurine (6-BA) or thidiazuron (TDZ) significantly induced the development of female flowers and increased the fruit number. Interestingly, the feminization effects of cytokinin were also detected on the androecious genotype of S. sebiferum which only produce male flowers. To further investigate the mechanism underlying the role of cytokinin in the flower development and sex differentiation, we performed the comparative transcriptome analysis of the floral buds of the androecious plants subjected to 6-BA. The results showed that there were separately 129, 352 and 642 genes differentially expressed at 6 h, 12 h and 24 h after 6-BA treatment. Functional analysis of the differentially expressed genes (DEGs) showed that many genes are related to the hormonal biosynthesis and signaling, nutrients translocation and cell cycle. Moreover, there were twenty one flowering-related genes identified to be differentially regulated by 6-BA treatment. Specifically, the gynoecium development-related genes SPATULA (SPT), KANADI 2 (KAN2), JAGGED (JAG) and Cytochrome P450 78A9 (CYP79A9) were significantly up-regulated, whereas the expression of PISTILLATA (PI), TATA Box Associated Factor II 59 (TAFII59) and MYB Domain Protein 108 (MYB108) that were important for male organ development was down-regulated in response to 6-BA treatment, demonstrating that cytokinin could directly target the floral organ identity genes to regulate the flower sex.

conclusionsOur work demonstrated that cytokinin is a potential regulator in female flower development in S. sebiferum. The transcriptome analysis of the floral sex transition from androecious to monoecious in response to cytokinin treatment on the androecious S. sebiferum provided valuable information related to the mechanism of sex determination in the perennial woody plants.

Indexed as

Gene Regulatory NetworksTranscriptomeBenzyl CompoundsCytokininsFlowersGene Expression ProfilingPhenylurea CompoundsPlant Growth RegulatorsPurinesSapiumThiadiazolesbenzylaminopurineBenzyl CompoundsCytokininsPhenylurea CompoundsPlant Growth RegulatorsPurinesThiadiazolesthidiazuron6-BABioenergy plantFloral feminizationSapium sebiferumTDZ

Identifiers

PMID29848288
PMCPMC5975670
OpenAlexW2805719476

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.