Evidence map›Paper›PMID 29847655›Full record

ArticleInvestigative ophthalmology & visual science2018

Family-Based Genome-Wide Association Study of South Indian Pedigrees Supports WNT7B as a Central Corneal Thickness Locus.

Bao Jian Fan, Xueli Chen, Nisha Sondhi, P Ferdinamarie Sharmila, Nagasamy Soumittra, Sarangapani Sripriya, Srinivasan Sacikala, Rashima Asokan, David S Friedman, Louis R Pasquale and 11 more

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Decreased scleral Wnt5aNature communications · 2025
    Article
  3. Article
  4. Myopia Genetics and Heredity.Children (Basel, Switzerland) · 2022
    Review
  5. International journal of molecular sciences · 2020
    Article
  6. Association of WNT7B and RSPO1 with Axial Length in School Children.Investigative ophthalmology & visual science · 2020
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 6 countries.

Bao Jian FanDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, United States.
Xueli ChenDepartment of Ophthalmology & Visual Science, Eye & Ear Nose Throat Hospital, Shanghai Medical College, Fudan University, Shanghai, China.
Nisha SondhiDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, United States.
P Ferdinamarie SharmilaSNONGC Department of Genetics and Molecular Biology, Vision Research Foundation, Sankara Nethralaya, Chennai, India.
Nagasamy SoumittraSNONGC Department of Genetics and Molecular Biology, Vision Research Foundation, Sankara Nethralaya, Chennai, India.
Sarangapani SripriyaSNONGC Department of Genetics and Molecular Biology, Vision Research Foundation, Sankara Nethralaya, Chennai, India.
Srinivasan SacikalaSNONGC Department of Genetics and Molecular Biology, Vision Research Foundation, Sankara Nethralaya, Chennai, India.
Rashima AsokanMedical Research Foundation, Sankara Nethralaya, Chennai, India.
David S FriedmanThe Dana Center for Preventive Ophthalmology, Johns Hopkins Medical School, Wilmer Eye Institute, Baltimore, Maryland, United States.
Louis R PasqualeDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, United States.
X Raymond GaoDepartment of Ophthalmology and Visual Sciences, University of Illinois at Chicago, Chicago, Illinois, United States.
Lingam VijayaMedical Research Foundation, Sankara Nethralaya, Chennai, India.
Jessica Cooke BaileyDepartment of Epidemiology and Biostatistics, Institute for Computational Biology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States.
Veronique VitartMRC Human Genetics Unit, Institute for Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Stuart MacGregorQIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia.
Christopher J HammondDepartment of Twin Research and Genetic Epidemiology, King's College London, London, United Kingdom.
Chiea Chuen KhorDivision of Human Genetics, Genome Institute of Singapore, Singapore.
Jonathan L HainesDepartment of Epidemiology and Biostatistics, Institute for Computational Biology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States.
Ronnie GeorgeMedical Research Foundation, Sankara Nethralaya, Chennai, India.
Janey L WiggsDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, United States.
Mexican American Glaucoma Genetic Study; International Glaucoma Genetics Consortium; and NEIGHBORHOOD Consortium
Sankara Nethralaya · INHarvard University · USMassachusetts Eye and Ear Infirmary · USCase Western Reserve University · USFudan University · CNGenome Institute of Singapore · SGJohns Hopkins University · USKing's College London · GBMRC Institute of Genetics and Molecular Medicine · GBQIMR Berghofer Medical Research Institute · AUUniversity of Illinois Chicago · USUniversity School · US

Funding

P30 Core Grant for Vision ResearchP30EY014104 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Eric A Pierce · 2002 to 2026
$15.1M
Translational Core for Therapeutic and Diagnostic DevelopmentP30EY001792 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MCANANY, JAMES JASON · 1985 to 2025
$14.8M
The NEIGHBORHOOD: POAG Heritable Overall Operational DatabaseR01EY022305 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2012 to 2025
$7.9M
Mexican American Glaucoma Genetic Study (MAGGS)R01EY022651 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI GAO, XIAOYI RAYMOND · 2012 to 2016
$4.2M
Gene Discovery in Familial KeratoconusR01EY023242 · NEI · DUKE UNIVERSITY · PI LIU, YUTAO · 2013 to 2023
$3.4M
Molecular Genetics of Norma Tension GlaucomaR01EY023512 · NEI · UNIVERSITY OF IOWA · PI FINGERT, JOHN H, MULLINS, ROBERT FOSTER · 2014 to 2017
$1.8M
INDO US Study of Ocular Quantitative Traits Related to GlaucomaR01EY027129 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2016 to 2018
$1.3M
Long Noncoding RNA lncLOXL1 and Exfoliation Syndrome.R21EY028671 · NEI · AUGUSTA UNIVERSITY · PI LIU, YUTAO · 2018 to 2019
$467k
India US Genetic Study of Ocular Quantitative TraitsR21EY018149 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2009 to 2010
$402k
Medical Research Council MC_UU_00007/10NEI NIH HHS P30 EY001792NEI NIH HHS P30 EY014104NEI NIH HHS R01 EY022305NEI NIH HHS R01 EY022651NEI NIH HHS R01 EY023242NEI NIH HHS R01 EY023512NEI NIH HHS R01 EY027129NEI NIH HHS R21 EY018149NEI NIH HHS R21 EY028671
6 · The paper itself

Abstract

Purpose: To identify genetic risk factors contributing to central corneal thickness (CCT) in individuals from South India, a population with a high prevalence of ocular disorders. Methods: One hundred ninety-five individuals from 15 large South Indian pedigrees were genotyped using the Omni2.5 bead array. Family-based association for CCT was conducted using the score test in MERLIN. Results: Genome-wide association study (GWAS) identified strongest association for single nucleotide polymorphisms (SNPs) in the first intron of WNT7B and CCT (top SNP rs9330813; β = -0.57, 95% confidence interval [CI]: -0.78 to -0.36; P = 1.7 × 10-7). We further investigated rs9330813 in a Latino cohort and four independent European cohorts. A meta-analysis of these data sets demonstrated statistically significant association between rs9330813 and CCT (β = -3.94, 95% CI: -5.23 to -2.66; P = 1.7 × 10-9). WNT7B SNPs located in the same genomic region that includes rs9330813 have previously been associated with CCT in Latinos but with other ocular quantitative traits related to myopia (corneal curvature and axial length) in a Japanese population (rs10453441 and rs200329677). To evaluate the specificity of the observed WNT7B association with CCT in the South Indian families, we completed an ocular phenome-wide association study (PheWAS) for the top WNT7B SNPs using 45 ocular traits measured in these same families including corneal curvature and axial length. The ocular PheWAS results indicate that in the South Indian families WNT7B SNPs are primarily associated with CCT. Conclusions: The results indicate robust evidence for association between WNT7B SNPs and CCT in South Indian pedigrees, and suggest that WNT7B SNPs can have population-specific effects on ocular quantitative traits.

Indexed as

Genome-Wide Association StudyPolymorphism, Single NucleotideAdolescentAdultAgedAged, 80 and overAsian PeopleCohort StudiesCorneaCorneal PachymetryFamily HealthFemaleGenotyping TechniquesHumansIndiaIntronsWNT7B protein, humanWnt Proteins

Identifiers

PMID29847655
PMCPMC5961220
OpenAlexW2806586695

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.