Evidence map›Paper›PMID 29846775›Full record

ArticlePlanta2018

The histone acetyltransferase GCN5 and the transcriptional coactivator ADA2b affect leaf development and trichome morphogenesis in Arabidopsis.

Jenna Kotak, Marina Saisana, Vasilis Gegas, Nikoletta Pechlivani, Athanasios Kaldis, Panagiotis Papoutsoglou, Athanasios Makris, Julia Burns, Ashley L Kendig, Minnah Sheikh and 7 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Planta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 3 countries.

Jenna KotakBiology Department, Muhlenberg College, Allentown, PA, USA.
Marina SaisanaDepartment of Botany, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Vasilis GegasNational Plant Phenomics Centre, Aberystwyth University, Aberystwyth, UK.
Nikoletta PechlivaniDepartment of Botany, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Athanasios KaldisDepartment of Botany, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Panagiotis PapoutsoglouDepartment of Botany, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Athanasios MakrisDepartment of Botany, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Julia BurnsBiology Department, Muhlenberg College, Allentown, PA, USA.
Ashley L KendigBiology Department, Muhlenberg College, Allentown, PA, USA.
Minnah SheikhBiology Department, Muhlenberg College, Allentown, PA, USA.
Cyrus E KuschnerBiology Department, Muhlenberg College, Allentown, PA, USA.
Gabrielle WhitneyBiology Department, Muhlenberg College, Allentown, PA, USA.
Hanna CaiolaBiology Department, Muhlenberg College, Allentown, PA, USA.
John H DoonanNational Plant Phenomics Centre, Aberystwyth University, Aberystwyth, UK.
Konstantinos E VlachonasiosDepartment of Botany, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece. kvlachon@bio.auth.gr.
Elizabeth R McCainBiology Department, Muhlenberg College, Allentown, PA, USA.
Amy T HarkBiology Department, Muhlenberg College, Allentown, PA, USA. amyhark@muhlenberg.edu.
Muhlenberg College · USAristotle University of Thessaloniki · GRAberystwyth University · GBBrown University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionThe histone acetyltransferase GCN5 and associated transcriptional coactivator ADA2b are required to couple endoreduplication and trichome branching. Mutation of ADA2b also disrupts the relationship between ploidy and leaf cell size. Dynamic chromatin structure has been established as a general mechanism by which gene function is temporally and spatially regulated, but specific chromatin modifier function is less well understood. To address this question, we have investigated the role of the histone acetyltransferase GCN5 and the associated coactivator ADA2b in developmental events in Arabidopsis thaliana. Arabidopsis plants with T-DNA insertions in GCN5 (also known as HAG1) or ADA2b (also known as PROPORZ1) display pleiotropic phenotypes including dwarfism and floral defects affecting fertility. We undertook a detailed characterization of gcn5 and ada2b phenotypic effects in rosette leaves and trichomes to establish a role for epigenetic control in these developmental processes. ADA2b and GCN5 play specific roles in leaf tissue, affecting cell growth and division in rosette leaves often in complex and even opposite directions. Leaves of gcn5 plants display overall reduced ploidy levels, while ada2b-1 leaves show increased ploidy. Endoreduplication leading to increased ploidy is also known to contribute to normal trichome morphogenesis. We demonstrate that gcn5 and ada2b mutants display alterations in the number and patterning of trichome branches, with ada2b-1 and gcn5-1 trichomes being significantly less branched, while gcn5-6 trichomes show increased branching. Elongation of the trichome stalk and branches also vary in different mutant backgrounds, with stalk length having an inverse relationship with branch number. Taken together, our data indicate that, in Arabidopsis, leaves and trichomes ADA2b and GCN5 are required to couple nuclear content with cell growth and morphogenesis.

Indexed as

ArabidopsisArabidopsis ProteinsFlow CytometryGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantHistone AcetyltransferasesMicroscopy, Interferencep300-CBP-Associated FactorPlant LeavesPloidiesPolymerase Chain ReactionTranscription FactorsTrichomesADA2b protein, ArabidopsisArabidopsis ProteinsGCN5 protein, ArabidopsisHistone Acetyltransferasesp300-CBP-Associated FactorTranscription FactorsChromatinEndoreduplicationEpigeneticsHistone acetyltransferase

Identifiers

PMID29846775
OpenAlexW2805893140

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.