Evidence map›Paper›PMID 29846577›Full record

ArticleFEMS microbiology letters2018

mRNA transcript distribution bias between Borrelia burgdorferi bacteria and their outer membrane vesicles.

Anjali Malge, Vikas Ghai, Panga Jaipal Reddy, David Baxter, Taek-Kyun Kim, Robert L Moritz, Kai Wang

Open access · bronzeAbstract read
In one paragraph

Article in FEMS microbiology letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

  1. Evaluating Outer Membrane Vesicle Isolation Techniques forAntibiotics (Basel, Switzerland) · 2025
    Article
  2. Purification of Borrelia burgdorferi Outer Membrane Vesicles.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  3. Pleomorphic Variants ofInternational journal of molecular sciences · 2023
    Article
  4. Microorganisms · 2022
    Article
  5. Review
  6. Review
  7. Environmental Plasticity of the RNA Content ofFrontiers in microbiology · 2021
    Article
  8. Review
  9. Article
  10. Effect ofAntibiotics (Basel, Switzerland) · 2020
    Article
  11. Microbial extracellular RNAs and their roles in human diseases.Experimental biology and medicine (Maywood, N.J.) · 2020
    Review
  12. Frontiers in microbiology · 2020
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anjali MalgeInstitute for Systems Biology, 401 Terry Avenue North Seattle, WA 98109-5263, USA.
Vikas GhaiInstitute for Systems Biology, 401 Terry Avenue North Seattle, WA 98109-5263, USA.
Panga Jaipal ReddyInstitute for Systems Biology, 401 Terry Avenue North Seattle, WA 98109-5263, USA.
David BaxterInstitute for Systems Biology, 401 Terry Avenue North Seattle, WA 98109-5263, USA.
Taek-Kyun KimInstitute for Systems Biology, 401 Terry Avenue North Seattle, WA 98109-5263, USA.
Robert L MoritzInstitute for Systems Biology, 401 Terry Avenue North Seattle, WA 98109-5263, USA.
Kai WangInstitute for Systems Biology, 401 Terry Avenue North Seattle, WA 98109-5263, USA.
North Seattle College · US

Funding

Quantitative Systems BiologyP50GM076547 · NIGMS · INSTITUTE FOR SYSTEMS BIOLOGY · PI DUDLEY, AIMEE M · 2006 to 2016
$30.6M
Shortening the development cycle time of Trans Proteomic Pipeline tools with high performance computingR01GM087221 · NIGMS · INSTITUTE FOR SYSTEMS BIOLOGY · PI DEUTSCH, ERIC, MORITZ, ROBERT L · 2010 to 2021
$6.0M
Reference Profiles of Extracellular RNA in 4 Body Fluids of Healthy HumansU01HL126496 · NHLBI · PACIFIC NORTHWEST RESEARCH INSTITUTE · PI GALAS, DAVID J., NICKERSON, DEBORAH A · 2014 to 2018
$3.5M
Extracellular Vesicles in Small Cell Lung Cancer Early DetectionU01CA213330 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI LEE, LY JAMES, NANASINKAM, SERGE PATRICK · 2017 to 2021
$2.7M
Accelerated emphysema in HIV-infected smokers: the role of extracellular vesiclesR01DA040395 · NIDA · OHIO STATE UNIVERSITY · PI DIAZ, PHILIP T, NANASINKAM, SERGE PATRICK · 2015 to 2019
$2.5M
miRNAs, Whole Diet, and Coronary Heart DiseaseR56HL133887 · NHLBI · DES MOINES UNIV OSTEOPATHIC MEDICAL CTR · PI DAI, JUN · 2016 to 2016
$830k
Novel peptide based biomarkers for Lyme disease diagnosticsR21AI133335 · NIAID · INSTITUTE FOR SYSTEMS BIOLOGY · PI MORITZ, ROBERT L · 2018 to 2019
$522k
NCI NIH HHS U01 CA213330NHLBI NIH HHS R56 HL133887NHLBI NIH HHS U01 HL126496NIAID NIH HHS R21 AI133335NIDA NIH HHS R01 DA040395NIGMS NIH HHS P50 GM076547NIGMS NIH HHS R01 GM087221
6 · The paper itself

Abstract

Borrelia burgdorferi, a bacterium in the spirochete phylum, is the causative agent of Lyme disease. Borrelia burgdorferi has a linear chromosome with a number of circular and linear plasmids. Bacteria, including B. burgdorferi, release spherical outer membrane vesicles (OMVs) that are known to carry secretory products including metabolites, nucleic acids and proteins. Herein, we provide the first comparative transcriptomic analysis of the vesicles released from B. burgdorferi. We identified a total of ∼1200 unique transcripts with at least one mapped read from the bacterial cell and its OMVs. We compared the spectrum of transcripts between bacterial cell and its OMVs, and found a biased distribution based on the source of transcripts, i.e. plasmid-encoded transcripts are more likely to be enriched in the OMVs. We validated the distribution for some of the transcripts by qPCR. This analysis provides the first evidence that some of the B. burgdorferi transcripts are preferentially packaged in OMV, which further suggest that the bacteria might use its OMVs for bacteria-bacteria or bacteria-host communications. This report also suggests a possible involvement of Borrelia-derived OMVs in the development of Lyme disease in both early and post disease syndromes.

Indexed as

Borrelia burgdorferiHumansLyme DiseasePlasmidsRNA, BacterialRNA, MessengerSecretory VesiclesRNA, BacterialRNA, Messenger

Identifiers

PMID29846577
PMCPMC5995203
OpenAlexW2806387591

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.