Evidence map›Paper›PMID 29844531›Full record

ArticleScientific reports2018

A qualitative proteome-wide lysine crotonylation profiling of papaya (Carica papaya L.).

Kaidong Liu, Changchun Yuan, Haili Li, Kunyan Chen, Lishi Lu, Chenjia Shen, Xiaolin Zheng

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
18.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 90 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Protein crotonylation: Basic research and clinical diseases.Biochemistry and biophysics reports · 2024
    Review
  8. Article
  9. Article
  10. Crotonylation modification and its role in diseases.Frontiers in molecular biosciences · 2024
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Comprehensive Profiling of Paper Mulberry (International journal of molecular sciences · 2022
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Kaidong LiuLife Science and Technology School, Lingnan Normal University, Zhanjiang, Guangdong, 524048, China. liukaidong2001@126.com.
Changchun YuanLife Science and Technology School, Lingnan Normal University, Zhanjiang, Guangdong, 524048, China.
Haili LiLife Science and Technology School, Lingnan Normal University, Zhanjiang, Guangdong, 524048, China.
Kunyan ChenLife Science and Technology School, Lingnan Normal University, Zhanjiang, Guangdong, 524048, China.
Lishi LuLife Science and Technology School, Lingnan Normal University, Zhanjiang, Guangdong, 524048, China.
Chenjia ShenCollege of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, 310036, China.
Xiaolin ZhengCollege of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou, 310035, China. zheng9393@163.com.
Lingnan Normal University · CNHangzhou Normal University · CNZhejiang Gongshang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lysine crotonylation of histone proteins is a recently-identified post-translational modification with multiple cellular functions. However, no information about lysine crotonylation of non-histone proteins in fruit cells is available. Using high-resolution LC-MS/MS coupled with highly sensitive immune-affinity antibody analysis, a global crotonylation proteome analysis of papaya fruit (Carica papaya L.) was performed. In total, 2,120 proteins with 5,995 lysine crotonylation sites were discovered, among which eight conserved motifs were identified. Bioinformatic analysis linked crotonylated proteins to multiple metabolic pathways, including biosynthesis of antibiotics, carbon metabolism, biosynthesis of amino acids, and glycolysis. particularly, 40 crotonylated enzymes involved in various pathways of amino acid metabolism were identified, suggesting a potential conserved function for crotonylation in the regulation of amino acid metabolism. Numerous crotonylation sites were identified in proteins involved in the hormone signaling and cell wall-related pathways. Our comprehensive crotonylation proteome indicated diverse functions for lysine crotonylation in papaya.

Indexed as

CaricaChromatography, LiquidLysineMetabolic Networks and PathwaysPlant ProteinsProteomeSubcellular FractionsTandem Mass SpectrometryLysinePlant ProteinsProteome

Identifiers

PMID29844531
PMCPMC5974297
OpenAlexW2805827044

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.