Evidence map›Paper›PMID 29844452›Full record

ArticleTranslational psychiatry2018

Linking spatial gene expression patterns to sex-specific brain structural changes on a mouse model of 16p11.2 hemideletion.

Vinod Jangir Kumar, Nicola M Grissom, Sarah E McKee, Hannah Schoch, Nicole Bowman, Robbert Havekes, Manoj Kumar, Stephen Pickup, Harish Poptani, Teresa M Reyes and 3 more

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 3 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 3 syntheses or guidelines pooled it, 56 citations in OpenAlex.

  1. Pooled it
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  6. Clinical spectrum and treatment responses in.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2026
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  19. A diffusion MRI-based spatiotemporal continuum of the embryonic mouse brain for probing gene-neuroanatomy connections.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 4 countries.

Vinod Jangir KumarDepartment of Psychiatry, Psychotherapy and Psychosomatics, RWTH Aachen University, Aachen, Germany.
Nicola M GrissomDepartment of Pharmacology, University of Pennsylvania, Philadelphia, PA, USA.
Sarah E McKeeDepartment of Pharmacology, University of Pennsylvania, Philadelphia, PA, USA.
Hannah SchochInstitute for Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA.
Nicole BowmanInstitute for Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA.
Robbert HavekesGroningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, Netherlands.ORCID http://orcid.org/0000-0003-0757-4739
Manoj KumarDepartment of Radiology, University of Pennsylvania, Philadelphia, PA, USA.
Stephen PickupDepartment of Radiology, University of Pennsylvania, Philadelphia, PA, USA.
Harish PoptaniDepartment of Radiology, University of Pennsylvania, Philadelphia, PA, USA.
Teresa M ReyesDepartment of Pharmacology, University of Pennsylvania, Philadelphia, PA, USA.
Mike HawrylyczAllen Institute for Brain Science, Seattle, WA, USA.
Ted AbelIowa Neuroscience Institute, Carver College of Medicine, University of Iowa, Iowa, IA, USA.ORCID http://orcid.org/0000-0003-2423-4592
Thomas Nickl-JockschatDepartment of Psychiatry, Psychotherapy and Psychosomatics, RWTH Aachen University, Aachen, Germany. thomas-nickl-jockschat@uiowa.edu.
Translational Therapeutics (United States) · USUniversity of Iowa · USUniversity of Pennsylvania · USAllen Institute for Brain Science · USMax Planck Institute for Biological Cybernetics · DEUniversity of Groningen · NLUniversity of Liverpool · GBUniversity of Minnesota · US

Funding

Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI Trevor M Penning · 2006 to 2026
$35.3M
Translational Research Training Program in Environmental Health SciencesT32ES019851 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI Kara A Bernstein, Trevor M Penning · 2012 to 2026
$6.0M
NIEHS NIH HHS P30 ES013508NIEHS NIH HHS T32 ES019851
6 · The paper itself

Abstract

Neurodevelopmental disorders, such as ASD and ADHD, affect males about three to four times more often than females. 16p11.2 hemideletion is a copy number variation that is highly associated with neurodevelopmental disorders. Previous work from our lab has shown that a mouse model of 16p11.2 hemideletion (del/+) exhibits male-specific behavioral phenotypes. We, therefore, aimed to investigate with magnetic resonance imaging (MRI), whether del/+ animals also exhibited a sex-specific neuroanatomical endophenotype. Using the Allen Mouse Brain Atlas, we analyzed the expression patterns of the 27 genes within the 16p11.2 region to identify which gene expression patterns spatially overlapped with brain structural changes. MRI was performed ex vivo and the resulting images were analyzed using Voxel-based morphometry for T1-weighted sequences and tract-based spatial statistics for diffusion-weighted images. In a subsequent step, all available in situ hybridization (ISH) maps of the genes involved in the 16p11.2 hemideletion were aligned to Waxholm space and clusters obtained by sex-specific group comparisons were analyzed to determine which gene(s) showed the highest expression in these regions. We found pronounced sex-specific changes in male animals with increased fractional anisotropy in medial fiber tracts, especially in those proximate to the striatum. Moreover, we were able to identify gene expression patterns spatially overlapping with male-specific structural changes that were associated with neurite outgrowth and the MAPK pathway. Of note, previous molecular studies have found convergent changes that point to a sex-specific dysregulation of MAPK signaling. This convergent evidence supports the idea that ISH maps can be used to meaningfully analyze imaging data sets.

Indexed as

Chromosome DeletionDNA Copy Number VariationsGene ExpressionAnimalsAutistic DisorderChromosome DisordersChromosomes, Human, Pair 16Diffusion Magnetic Resonance ImagingDisease Models, AnimalFemaleGray MatterHumansIn Situ HybridizationIntellectual DisabilityMaleMAP Kinase Signaling System

Identifiers

PMID29844452
PMCPMC5974415
OpenAlexW2805189754

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.