Evidence map›Paper›PMID 29844386›Full record

ArticleNature communications2018

The histone demethylase Phf2 acts as a molecular checkpoint to prevent NAFLD progression during obesity.

Julien Bricambert, Marie-Clotilde Alves-Guerra, Pauline Esteves, Carina Prip-Buus, Justine Bertrand-Michel, Hervé Guillou, Christopher J Chang, Mark N Vander Wal, François Canonne-Hergaux, Philippe Mathurin and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Hp1bp3 loss links chromatin reorganization to metabolic vulnerability in glioma.Proceedings of the National Academy of Sciences of the United States of America · 2026
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 2 countries.

Julien BricambertINSERM, U1016, Institut Cochin, Paris, France.
Marie-Clotilde Alves-GuerraINSERM, U1016, Institut Cochin, Paris, France.
Pauline EstevesINSERM, U1016, Institut Cochin, Paris, France.
Carina Prip-BuusINSERM, U1016, Institut Cochin, Paris, France.
Justine Bertrand-MichelPlateau de lipidomique, Bio-Medical Federative Research Institute of Toulouse, INSERM, Plateforme MetaToul, Toulouse, France.
Hervé GuillouINRA-ToxAlim, Toxicologie Intégrative et Métabolisme, Toulouse, France.ORCID http://orcid.org/0000-0002-5363-9081
Christopher J ChangDepartment of Chemistry and Molecular and Cell Biology, University of California, Berkeley, CA, 94720, USA.
Mark N Vander WalDepartment of Chemistry and Molecular and Cell Biology, University of California, Berkeley, CA, 94720, USA.
François Canonne-HergauxINSERM U1043-CPTP, Toulouse, F-31300, France.
Philippe MathurinDepartment of Hepatology, Lille University Hospital, Lille, France.
Violeta RaverdyINSERM, U859 Biotherapies for Diabetes, Lille, France.
François PattouINSERM, U859 Biotherapies for Diabetes, Lille, France.ORCID http://orcid.org/0000-0001-8388-3766
Jean GirardINSERM, U1016, Institut Cochin, Paris, France.
Catherine PosticINSERM, U1016, Institut Cochin, Paris, France.
Renaud DentinINSERM, U1016, Institut Cochin, Paris, France. renaud.dentin@inserm.fr.ORCID http://orcid.org/0000-0003-0988-4458
Délégation Paris 5 · FRInserm · FRCentre National de la Recherche Scientifique · FRHoward Hughes Medical Institute · USToxicologie Alimentaire · FRUniversité Toulouse III - Paul Sabatier · FRUniversity of California, Berkeley · US

Funding

Molecular Imaging Probes To Study Redox BiologyR01GM079465 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Christopher J. Chang · 2006 to 2026
$7.8M
NIGMS NIH HHS R01 GM079465
6 · The paper itself

Abstract

Aberrant histone methylation profile is reported to correlate with the development and progression of NAFLD during obesity. However, the identification of specific epigenetic modifiers involved in this process remains poorly understood. Here, we identify the histone demethylase Plant Homeodomain Finger 2 (Phf2) as a new transcriptional co-activator of the transcription factor Carbohydrate Responsive Element Binding Protein (ChREBP). By specifically erasing H3K9me2 methyl-marks on the promoter of ChREBP-regulated genes, Phf2 facilitates incorporation of metabolic precursors into mono-unsaturated fatty acids, leading to hepatosteatosis development in the absence of inflammation and insulin resistance. Moreover, the Phf2-mediated activation of the transcription factor NF-E2-related factor 2 (Nrf2) further reroutes glucose fluxes toward the pentose phosphate pathway and glutathione biosynthesis, protecting the liver from oxidative stress and fibrogenesis in response to diet-induced obesity. Overall, our findings establish a downstream epigenetic checkpoint, whereby Phf2, through facilitating H3K9me2 demethylation at specific gene promoters, protects liver from the pathogenesis progression of NAFLD.

Indexed as

DemethylationAnimalsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCells, CulturedEnzyme ActivationGlucoseGlutathioneHistone DemethylasesHistonesHomeodomain ProteinsHumansLiverMaleMethylationMiceMice, Inbred C57BLBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsGlucoseGlutathioneHistone DemethylasesHistonesHomeodomain ProteinsMlxipl protein, mouseNfe2l2 protein, mouseNF-E2-Related Factor 2Nuclear ProteinsPHF2 protein, mouseTranscription Factors

Identifiers

PMID29844386
PMCPMC5974278
OpenAlexW2805997803

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.