Evidence map›Paper›PMID 29844351›Full record

ArticleScientific reports2018

An orthogonal system for heterologous expression of actinobacterial lasso peptides in Streptomyces hosts.

Jimmy Mevaere, Christophe Goulard, Olha Schneider, Olga N Sekurova, Haiyan Ma, Séverine Zirah, Carlos Afonso, Sylvie Rebuffat, Sergey B Zotchev, Yanyan Li

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Lasso Peptides-A New Weapon Against Superbugs.International journal of molecular sciences · 2025
    Review
  2. Article
  3. Review
  4. Article
  5. Small Natural Cyclic Peptides from DBAASP Database.Pharmaceuticals (Basel, Switzerland) · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Harnessing regulatory networks in Actinobacteria for natural product discovery.Journal of industrial microbiology & biotechnology · 2024
    Review
  10. Article
  11. Bacterial natural product discovery by heterologous expression.Journal of industrial microbiology & biotechnology · 2023
    Review
  12. Review
  13. Metagenome-Assembled Genome ofMicroorganisms · 2022
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. How to harness biosynthetic gene clusters of lasso peptides.Journal of industrial microbiology & biotechnology · 2020
    Review
  19. Lasso Peptides: Heterologous Production and Potential Medical Application.Frontiers in bioengineering and biotechnology · 2020
    Review
  20. Genome mining for lasso peptides: past, present, and future.Journal of industrial microbiology & biotechnology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jimmy MevaereLaboratory « Molecules of Communication and Adaptation of Microorganisms » (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique, CP 54, 57 rue Cuvier, 75005, Paris, France.
Christophe GoulardLaboratory « Molecules of Communication and Adaptation of Microorganisms » (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique, CP 54, 57 rue Cuvier, 75005, Paris, France.
Olha SchneiderDepartment of Biotechnology, Norwegian University of Science and Technology NTNU, N-7491, Trondheim, Norway.
Olga N SekurovaDepartment of Pharmacognosy, University of Vienna, Althanstrasse 14, A-1090, Vienna, Austria.
Haiyan MaLaboratory « Molecules of Communication and Adaptation of Microorganisms » (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique, CP 54, 57 rue Cuvier, 75005, Paris, France.
Séverine ZirahLaboratory « Molecules of Communication and Adaptation of Microorganisms » (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique, CP 54, 57 rue Cuvier, 75005, Paris, France.
Carlos AfonsoNormandie Université, INSA Rouen, UNIROUEN, CNRS, COBRA, Rouen, France.ORCID 0000-0002-2406-5664
Sylvie RebuffatLaboratory « Molecules of Communication and Adaptation of Microorganisms » (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique, CP 54, 57 rue Cuvier, 75005, Paris, France.
Sergey B ZotchevDepartment of Pharmacognosy, University of Vienna, Althanstrasse 14, A-1090, Vienna, Austria. sergey.zotchev@univie.ac.at.ORCID 0000-0002-9324-245X
Yanyan LiLaboratory « Molecules of Communication and Adaptation of Microorganisms » (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique, CP 54, 57 rue Cuvier, 75005, Paris, France. yanyanli@mnhn.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lasso peptides are ribosomally synthesized and post-translationally modified peptides produced by bacteria. They are characterized by an unusual lariat-knot structure. Targeted genome scanning revealed a wide diversity of lasso peptides encoded in actinobacterial genomes, but cloning and heterologous expression of these clusters turned out to be problematic. To circumvent this, we developed an orthogonal expression system for heterologous production of actinobacterial lasso peptides in Streptomyces hosts based on a newly-identified regulatory circuit from Actinoalloteichus fjordicus. Six lasso peptide gene clusters, mainly originating from marine Actinobacteria, were chosen for proof-of-concept studies. By varying the Streptomyces expression hosts and a small set of culture conditions, three new lasso peptides were successfully produced and characterized by tandem MS. The newly developed expression system thus sets the stage to uncover and bioengineer the chemo-diversity of actinobacterial lasso peptides. Moreover, our data provide some considerations for future bioprospecting efforts for such peptides.

Indexed as

ActinobacteriaAmino Acid SequenceAnti-Bacterial AgentsBacterial ProteinsGenes, BacterialMicrobial Sensitivity TestsMultigene FamilyPeptidesStreptomycesTandem Mass SpectrometryAnti-Bacterial AgentsBacterial ProteinsPeptides

Identifiers

PMID29844351
PMCPMC5974421

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.