Evidence map›Paper›PMID 29844157›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Genome-wide regulation of light-controlled seedling morphogenesis by three families of transcription factors.

Hui Shi, Mohan Lyu, Yiwen Luo, Shoucheng Liu, Yue Li, Hang He, Ning Wei, Xing Wang Deng, Shangwei Zhong

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Single-molecule views of chromatin accessibility and structure during photomorphogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Genetic loci and functional genes conferring deep-sowing tolerance across multiple environments in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hui ShiState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China.
Mohan LyuState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China.
Yiwen LuoState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China.
Shoucheng LiuState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China.
Yue LiState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China.
Hang HeState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China.
Ning WeiDepartment of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06520.
Xing Wang DengState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China; deng@pku.edu.cn shangwei.zhong@pku.edu.cn.
Shangwei ZhongState Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University, 100871 Beijing, China; deng@pku.edu.cn shangwei.zhong@pku.edu.cn.

Funding

Analysis of a Light-Regulated Development SwitchR37GM047850 · NIGMS · YALE UNIVERSITY · PI DENG, XING WANG · 2004 to 2013
$5.7M
LIGHT SIGNAL TRANDUCTION IN ARABIDOPSISR01GM047850 · NIGMS · YALE UNIVERSITY · PI WEI, NING · 1996 to 2018
$4.1M
NIGMS NIH HHS R01 GM047850NIGMS NIH HHS R37 GM047850
6 · The paper itself

Abstract

Three families of transcription factors have been reported to play key roles in light control of

Indexed as

ArabidopsisArabidopsis ProteinsCarrier ProteinsDarknessDNA-Binding ProteinsGene Expression Regulation, PlantGenome-Wide Association StudyHypocotylLightMorphogenesisMutationNuclear ProteinsSeedlingsSignal TransductionTranscriptional ActivationTranscription FactorsArabidopsis ProteinsCarrier ProteinsDNA-Binding ProteinsHYH protein, ArabidopsisNuclear ProteinsTranscription FactorsEIN3/EIL1ethylene signallight signalPIFsplant photobiology

Identifiers

PMID29844157
PMCPMC6016779

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.