Evidence map›Paper›PMID 29813067›Full record

ArticlePLoS genetics2018

Spontaneous gain of susceptibility suggests a novel mechanism of resistance to hybrid dysgenesis in Drosophila virilis.

Sergei Y Funikov, Dina A Kulikova, George S Krasnov, Alexander P Rezvykh, Lubov N Chuvakova, Natalia G Shostak, Elena S Zelentsova, Justin P Blumenstiel, Michael B Evgen'ev

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Hybrid dysgenesis inMobile DNA · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sergei Y FunikovEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-3336-6119
Dina A KulikovaKoltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia.
George S KrasnovEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-6493-8378
Alexander P RezvykhEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Lubov N ChuvakovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Natalia G ShostakEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Elena S ZelentsovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Justin P BlumenstielDepartment of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, United States of America.
Michael B Evgen'evEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0001-8554-2121
Engelhardt Institute of Molecular Biology · RUKoltzov Institute of Developmental Biology · RUUniversity of Kansas · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Syndromes of hybrid dysgenesis (HD) have been critical for our understanding of the transgenerational maintenance of genome stability by piRNA. HD in D. virilis represents a special case of HD since it includes simultaneous mobilization of a set of TEs that belong to different classes. The standard explanation for HD is that eggs of the responder strains lack an abundant pool of piRNAs corresponding to the asymmetric TE families transmitted solely by sperm. However, there are several strains of D. virilis that lack asymmetric TEs, but exhibit a "neutral" cytotype that confers resistance to HD. To characterize the mechanism of resistance to HD, we performed a comparative analysis of the landscape of ovarian small RNAs in strains that vary in their resistance to HD mediated sterility. We demonstrate that resistance to HD cannot be solely explained by a maternal piRNA pool that matches the assemblage of TEs that likely cause HD. In support of this, we have witnessed a cytotype shift from neutral (N) to susceptible (M) in a strain devoid of all major TEs implicated in HD. This shift occurred in the absence of significant change in TE copy number and expression of piRNAs homologous to asymmetric TEs. Instead, this shift is associated with a change in the chromatin profile of repeat sequences unlikely to be causative of paternal induction. Overall, our data suggest that resistance to TE-mediated sterility during HD may be achieved by mechanisms that are distinct from the canonical syndromes of HD.

Indexed as

AnimalsChromatinComputational BiologyDNA Copy Number VariationsDNA Transposable ElementsDrosophilaFemaleGenomic InstabilityHigh-Throughput Nucleotide SequencingInfertilityMaleOvaryReal-Time Polymerase Chain ReactionRNA, Small InterferingSequence Analysis, RNAChromatinDNA Transposable ElementsRNA, Small Interfering

Identifiers

PMID29813067
PMCPMC5993320
OpenAlexW2805843030

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.