Evidence map›Paper›PMID 29804207›Full record

ArticleCurrent microbiology2018

Complete Genome Sequence of Cd(II)-Resistant Arthrobacter sp. PGP41, a Plant Growth-Promoting Bacterium with Potential in Microbe-Assisted Phytoremediation.

Xihui Xu, Meng Xu, Qiming Zhao, Yan Xia, Chen Chen, Zhenguo Shen

Abstract read
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In one paragraph

Article in Current microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xihui XuCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Meng XuCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Qiming ZhaoCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Yan XiaCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Chen ChenCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China. chenchen@njau.edu.cn.
Zhenguo ShenCollege of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.

Funding

China Postdoctoral Science Foundation 2016T90468National Key Research and Development Program of China 2016YFD0800803National Natural Science Foundation of China 31501689National Natural Science Foundation of China 31770404Science Foundation of Jiangsu Province, China BK20150670
6 · The paper itself

Abstract

Microbe-assisted phytoremediation has great potential for practical applications. Plant growth-promoting bacteria (PGPB) with heavy metal (HM) resistance are important for the implementation of PGPB-assisted phytoremediation of HM-contaminated environments. Arthrobacter sp. PGP41 is a Cd(II)-resistant bacterium isolated from the rhizosphere soils of a Cd(II) hyperaccumulator plant, Solanum nigrum. Strain PGP41 can significantly improve plant seedling and root growth under Cd(II) stress conditions. This bacterium exhibited the ability to produce high levels of indole-3-acetic acid (IAA), as well as the ability to fix nitrogen and solubilize phosphate, and it possessed 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity. Here, we present the complete genome sequence of strain PGP41. The genome consists of a single chromosome with a G+C content of 65.38% and no plasmids. The genome encodes 3898 genes and contains 49 tRNA and 12 rRNA genes. Multiple genes associated with plant growth promotion were identified in the genome. The whole genome sequence of PGP41 provides information useful for further clarifying the molecular mechanisms behind plant growth promotion by PGPB and facilitates its potential use as an inoculum in the bioremediation of HM-contaminated environments.

Indexed as

Genome, BacterialPlant DevelopmentArthrobacterBase SequenceCadmiumComputational BiologyDNA, BacterialGenes, BacterialMicrobial Sensitivity TestsPhylogenyPlant RootsPlantsRhizosphereRNA, Ribosomal, 16SSoil MicrobiologySoil PollutantsCadmiumDNA, BacterialRNA, Ribosomal, 16SSoil Pollutants

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.