Evidence map›Paper›PMID 29801658›Full record

ArticleClinical radiology2018

Integrative radiomics expression predicts molecular subtypes of primary clear cell renal cell carcinoma.

Q Yin, S-C Hung, W K Rathmell, L Shen, L Wang, W Lin, J R Fielding, A H Khandani, M E Woods, M I Milowsky and 3 more

Abstract read
In one paragraph

Article in Clinical radiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 35 citations in OpenAlex.

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  19. Radiomics in hepatic metastasis by colorectal cancer.Infectious agents and cancer · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 4 countries.

Q YinInformation Science and Technology College, Dalian Maritime University, Dalian, 116026, China; Department of Radiology, University of North Carolina, Chapel Hill, NC 27599, USA.
S-C HungDepartment of Radiology, University of North Carolina, Chapel Hill, NC 27599, USA; Department of Radiology, Taipei Veterans General Hospital, Taipei 11217, Taiwan; School of Medicine, National Yang-Ming University, Taipei 11221, Taiwan; Department of Biomedical Imaging and Radiological Sciences, School of Biomedical Science of Engineering, National Yang-Ming University, Taipei 11221, Taiwan.
W K RathmellLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599, USA; Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37232, USA; Department of Cancer Biology, Vanderbilt University, Nashville, TN 37232, USA; Vanderbilt-Ingram Cancer Center, Vanderbilt University, Nashville, TN 37232, USA.
L ShenInformation Science and Technology College, Dalian Maritime University, Dalian, 116026, China.
L WangDepartment of Radiology, University of North Carolina, Chapel Hill, NC 27599, USA.
W LinDepartment of Radiology, University of North Carolina, Chapel Hill, NC 27599, USA.
J R FieldingDepartment of Radiology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
A H KhandaniDepartment of Radiology, University of North Carolina, Chapel Hill, NC 27599, USA.
M E WoodsLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599, USA; Department of Urology, University of North Carolina, Chapel Hill, NC 27599, USA.
M I MilowskyLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599, USA; Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37232, USA; Department of Urology, University of North Carolina, Chapel Hill, NC 27599, USA.
S A BrooksLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599, USA.
E M WallenDepartment of Urology, University of North Carolina, Chapel Hill, NC 27599, USA.
D ShenDepartment of Radiology, University of North Carolina, Chapel Hill, NC 27599, USA; Department of Brain and Cognitive Engineering, Korea University, Seoul 02841, Republic of Korea. Electronic address: dgshen@med.unc.edu.
University of North Carolina at Chapel Hill · USDalian Maritime University · CNKorea University · KRTaipei Veterans General Hospital · TWThe University of Texas Southwestern Medical Center · USUNC Lineberger Comprehensive Cancer CenterVanderbilt University · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
TOXICOLOGYT32ES007126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ILONA JASPERS, Bernard E. Weissman · 1985 to 2026
$13.0M
Longitudinal Mapping of Human Brain Development in the First Years of LifeR01EB008374 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI YAP, PEW-THIAN · 2009 to 2024
$5.1M
Development of Robust Brain Measurement Tools Informed by Ultrahigh Field 7T MRIR01EB006733 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI YAP, PEW-THIAN · 2008 to 2020
$4.5M
A Novel Imaging Informatics Platform for Craniomaxillofacial SurgeryR01DE022676 · NIDCR · METHODIST HOSPITAL RESEARCH INSTITUTE · PI GATENO, JAIME · 2011 to 2020
$4.0M
Quantifying Brain Abnormality by Multimodality Neuroimage Analysis,R01AG041721 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, MINGXIA · 2012 to 2019
$3.0M
Infant Brain Measurement and Super-Resolution Atlas ConstructionR01MH100217 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SHEN, DINGGANG · 2013 to 2016
$2.3M
Translational Research in Oncology Training ProgramT32CA160001 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI SAWYERS, CHARLES L. · 2011 to 2020
$2.0M
Imaging Genomics Based Brain Disease PredictionR01AG049371 · NIA · UNIVERSITY OF TEXAS ARLINGTON · PI HUANG, HENG · 2015 to 2019
$2.0M
Automatic Pelvic Organ Delineation in Prostate Cancer TreatmentR01CA206100 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIAN, JUN · 2016 to 2022
$1.7M
Assessing Large-scale Brain Connectivities in Mild Cognitive ImpairmentR01AG042599 · NIA · UNIVERSITY OF GEORGIA · PI LIU, TIANMING · 2013 to 2017
$1.4M
Fast, Robust Analysis of Large Population DataR01EB009634 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SHEN, DINGGANG · 2011 to 2014
$1.3M
NCI NIH HHS P30 CA016086NCI NIH HHS R01 CA206100NCI NIH HHS T32 CA160001NIA NIH HHS R01 AG041721NIA NIH HHS R01 AG042599NIA NIH HHS R01 AG049371NIBIB NIH HHS R01 EB006733NIBIB NIH HHS R01 EB008374NIBIB NIH HHS R01 EB009634NIDCR NIH HHS R01 DE022676NIEHS NIH HHS T32 ES007126NIMH NIH HHS R01 MH100217NIMH NIH HHS R21 MH108914
6 · The paper itself

Abstract

aimTo identify combined positron-emission tomography (PET)/magnetic resonance imaging (MRI)-based radiomics as a surrogate biomarker of intratumour disease risk for molecular subtype ccA and ccB in patients with primary clear cell renal cell carcinoma (ccRCC). MATERIALS AND

methodsPET/MRI data were analysed retrospectively from eight patients. One hundred and sixty-eight radiomics features for each tumour sampling based on the regionally sampled tumours with 23 specimens were extracted. Sparse partial least squares discriminant analysis (SPLS-DA) was applied to feature screening on high-throughput radiomics features and project the selected features to low-dimensional intrinsic latent components as radiomics signatures. In addition, multilevel omics datasets were leveraged to explore the complementing information and elevate the discriminative ability.

resultsThe correct classification rate (CCR) for molecular subtype classification by SPLS-DA using only radiomics features was 86.96% with permutation test p=7×10

conclusionFeatured with high accuracy, an integrated multi-omics model of PET/MRI-based radiomics could be the first non-invasive investigation for disease risk stratification and guidance of treatment in patients with primary ccRCC.

Indexed as

Multimodal ImagingBiomarkers, TumorCarcinoma, Renal CellContrast MediaHumansImaging, Three-DimensionalKidney NeoplasmsMagnetic Resonance ImagingNeoplasm GradingNeoplasm StagingPositron-Emission TomographyRetrospective StudiesBiomarkers, TumorContrast Media

Identifiers

PMID29801658
PMCPMC6078810
OpenAlexW2804263616

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.