Evidence map›Paper›PMID 29799838›Full record

ArticlePLoS genetics2018

Nuclear m6A reader YTHDC1 regulates alternative polyadenylation and splicing during mouse oocyte development.

Seth D Kasowitz, Jun Ma, Stephen J Anderson, N Adrian Leu, Yang Xu, Brian D Gregory, Richard M Schultz, P Jeremy Wang

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 359 papers.

0numbers the graph read from it
0cells of the map it votes in
359citing papers in PubMed
19.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

359 citing papers in PubMed, 560 citations in OpenAlex.

  1. Article
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  5. Emerging roles of mJournal of assisted reproduction and genetics · 2026
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  6. SuppressedInternational journal of molecular sciences · 2026
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  7. Methylation marks breast cancer metastasis: The roles of mThe Journal of biological chemistry · 2026
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  10. YTHDC1 recognizes METTL16-dependent mProceedings of the National Academy of Sciences of the United States of America · 2026
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  12. POMC neuron METTL14/mNature communications · 2026
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  13. Review
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  15. Comprehensive Profiling of NAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  16. Review
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  18. NNature reviews. Cancer · 2026
    Review
  19. Review
  20. hnRNPU Safeguards Oocyte Development and Female Fertility via Regulation of Alternative Splicing.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article

299 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Seth D KasowitzDepartment of Biomedical Sciences, University of Pennsylvania, Philadelphia, United States of America.
Jun MaDepartment of Biomedical Sciences, University of Pennsylvania, Philadelphia, United States of America.
Stephen J AndersonDepartment of Biology, University of Pennsylvania, Philadelphia, United States of America.ORCID 0000-0002-5782-7303
N Adrian LeuDepartment of Biomedical Sciences, University of Pennsylvania, Philadelphia, United States of America.
Yang XuDepartment of Biomedical Sciences, University of Pennsylvania, Philadelphia, United States of America.
Brian D GregoryDepartment of Biology, University of Pennsylvania, Philadelphia, United States of America.ORCID 0000-0001-7532-0138
Richard M SchultzDepartment of Biology, University of Pennsylvania, Philadelphia, United States of America.
P Jeremy WangDepartment of Biomedical Sciences, University of Pennsylvania, Philadelphia, United States of America.ORCID 0000-0003-2311-4089
University of Pennsylvania · US

Funding

PROTEIN PHOSPHORYLATION IN PREIMPLANTATION DEVELOPMENTR01HD022681 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI SCHULTZ, RICHARD MORRIS · 1987 to 2017
$3.6M
Regulation of meiosis in miceR35GM118052 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI WANG, PEIJING JEREMY · 2016 to 2020
$2.8M
GENE EXPRESSION IN THE PREIMPLANTATION EMBRYOR37HD022681 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI SCHULTZ, RICHARD M · 1997 to 2006
$2.2M
NICHD NIH HHS R01 HD022681NICHD NIH HHS R37 HD022681NIGMS NIH HHS R35 GM118052NIH HHS R01HD022681
6 · The paper itself

Abstract

The N6-methyladenosine (m6A) modification is the most prevalent internal RNA modification in eukaryotes. The majority of m6A sites are found in the last exon and 3' UTRs. Here we show that the nuclear m6A reader YTHDC1 is essential for embryo viability and germline development in mouse. Specifically, YTHDC1 is required for spermatogonial development in males and for oocyte growth and maturation in females; Ythdc1-deficient oocytes are blocked at the primary follicle stage. Strikingly, loss of YTHDC1 leads to extensive alternative polyadenylation in oocytes, altering 3' UTR length. Furthermore, YTHDC1 deficiency causes massive alternative splicing defects in oocytes. The majority of splicing defects in mutant oocytes are rescued by introducing wild-type, but not m6A-binding-deficient, YTHDC1. YTHDC1 is associated with the pre-mRNA 3' end processing factors CPSF6, SRSF3, and SRSF7. Thus, YTHDC1 plays a critical role in processing of pre-mRNA transcripts in the oocyte nucleus and may have similar non-redundant roles throughout fetal development.

Indexed as

3' Untranslated RegionsAdenosineAlternative SplicingAnimalsCell NucleusCleavage And Polyadenylation Specificity FactorEmbryonic DevelopmentExonsFemaleMaleMiceMice, TransgenicMutationNerve Tissue ProteinsOocytesPolyadenylation3' Untranslated RegionsAdenosineCleavage And Polyadenylation Specificity FactorCPSF6 protein, mouseNerve Tissue ProteinsN-methyladenosineRNA, MessengerRNA PrecursorsRNA Splicing FactorsSerine-Arginine Splicing FactorsSrsf3 protein, mouse

Identifiers

PMID29799838
PMCPMC5991768
OpenAlexW2803510059

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.