Evidence map›Paper›PMID 29799276›Full record

ArticleBiomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals2018

Microarray analysis of miRNA expression profiles following whole body irradiation in a mouse model.

Molykutty J Aryankalayil, Sunita Chopra, Adeola Makinde, Iris Eke, Joel Levin, Uma Shankavaram, Laurel MacMillan, Claire Vanpouille-Box, Sandra Demaria, C Norman Coleman

Open access · greenAbstract read
In one paragraph

Article in Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 37 citations in OpenAlex.

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  7. Sex differences in radiation research.International journal of radiation biology · 2024
    Article
  8. Small RNAs, spermatogenesis, and male infertility: a decade of retrospect.Reproductive biology and endocrinology : RB&E · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Molykutty J Aryankalayila Radiation Oncology Branch, Center for Cancer Research , National Cancer Institute , Bethesda , MD , USA.
Sunita Chopraa Radiation Oncology Branch, Center for Cancer Research , National Cancer Institute , Bethesda , MD , USA.
Adeola Makindea Radiation Oncology Branch, Center for Cancer Research , National Cancer Institute , Bethesda , MD , USA.
Iris Ekea Radiation Oncology Branch, Center for Cancer Research , National Cancer Institute , Bethesda , MD , USA.
Joel Levina Radiation Oncology Branch, Center for Cancer Research , National Cancer Institute , Bethesda , MD , USA.
Uma Shankavarama Radiation Oncology Branch, Center for Cancer Research , National Cancer Institute , Bethesda , MD , USA.
Laurel MacMillanb Gryphon Scientific , Takoma Park , MD , USA.
Claire Vanpouille-Boxc Department of Radiation Oncology , Weill Cornell Medicine , New York , NY , USA.
Sandra Demariac Department of Radiation Oncology , Weill Cornell Medicine , New York , NY , USA.
C Norman Colemana Radiation Oncology Branch, Center for Cancer Research , National Cancer Institute , Bethesda , MD , USA.
Center for Cancer Research · USNational Cancer Institute · USCornell University · USGryphon Scientific (United States) · USWeill Cornell Medicine · US

Funding

Radiation-induced molecular targetsZIABC010670 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI COLEMAN, NORMAN · 2009 to 2024
$17.3M
Molecular-Targeted Radiation TherapyZ01BC010670 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI COLEMAN, C NORMAN · 2005 to 2008
$1.4M
Intramural NIH HHS Z01 BC010670Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC010670
6 · The paper itself

Abstract

contextAccidental exposure to life-threatening radiation in a nuclear event is a major concern; there is an enormous need for identifying biomarkers for radiation biodosimetry to triage populations and treat critically exposed individuals.

objectiveTo identify dose-differentiating miRNA signatures from whole blood samples of whole body irradiated mice.

methodsMice were whole body irradiated with X-rays (2 Gy-15 Gy); blood was collected at various time-points post-exposure; total RNA was isolated; miRNA microarrays were performed; miRNAs differentially expressed in irradiated vs. unirradiated controls were identified; feature extraction and classification models were applied to predict dose-differentiating miRNA signature.

resultsWe observed a time and dose responsive alteration in the expression levels of miRNAs. Maximum number of miRNAs were altered at 24-h and 48-h time-points post-irradiation. A 23-miRNA signature was identified using feature selection algorithms and classifier models. An inverse correlation in the expression level changes of miR-17 members, and their targets were observed in whole body irradiated mice and non-human primates.

conclusionWhole blood-based miRNA expression signatures might be used for predicting radiation exposures in a mass casualty nuclear incident.

Indexed as

AnimalsDose-Response Relationship, RadiationGene Expression ProfilingMiceMicroarray AnalysisMicroRNAsRadiation ExposureTime FactorsWhole-Body IrradiationMicroRNAsbio-dosimetrybiomarkermicroRNAsRadiation

Identifiers

PMID29799276
PMCPMC6982201
OpenAlexW2804927712

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.