Evidence map›Paper›PMID 29799009›Full record

ArticleNature communications2018

Whole-genome sequencing reveals genomic signatures associated with the inflammatory microenvironments in Chinese NSCLC patients.

Cheng Wang, Rong Yin, Juncheng Dai, Yayun Gu, Shaohua Cui, Hongxia Ma, Zhihong Zhang, Jiaqi Huang, Na Qin, Tao Jiang and 16 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 3 pooled it
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 3 syntheses or guidelines pooled it, 135 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 4 institutions in 1 country.

Cheng WangDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Rong YinDepartment of Thoracic Surgery, Jiangsu Cancer Hospital, Jiangsu Institute of Cancer Research, Nanjing Medical University Affiliated Cancer Hospital, Jiangsu Key Laboratory of Molecular and Translational Cancer Research, 210029, Nanjing, China.
Juncheng DaiDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Yayun GuDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Shaohua CuiDepartment of Respiratory Medicine, Shanghai Chest Hospital, Shanghai Jiao Tong University, 200030, Shanghai, China.
Hongxia MaDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Zhihong ZhangDepartment of Pathology, First Affiliated Hospital, Nanjing Medical University, 210029, Nanjing, China.
Jiaqi HuangCellular Biomedicine Group, Inc., 200233, Shanghai, China.
Na QinDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Tao JiangDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Liguo GengDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Meng ZhuDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Zhening PuDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Fangzhi DuDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Yuzhuo WangDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Jianshui YangDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Liang ChenDepartment of Thoracic Surgery, First Affiliated Hospital, Nanjing Medical University, 210029, Nanjing, China.
Qianghu WangDepartment of Bioinformatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 211116, Nanjing, China.
Yue JiangDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Lili DongDepartment of Respiratory Medicine, Shanghai Chest Hospital, Shanghai Jiao Tong University, 200030, Shanghai, China.
Yihong YaoCellular Biomedicine Group, Inc., 200233, Shanghai, China.
Guangfu JinDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.ORCID http://orcid.org/0000-0003-0249-5337
Zhibin HuDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China.
Liyan JiangDepartment of Respiratory Medicine, Shanghai Chest Hospital, Shanghai Jiao Tong University, 200030, Shanghai, China. Jiang_liyan2000@126.com.
Lin XuDepartment of Thoracic Surgery, Jiangsu Cancer Hospital, Jiangsu Institute of Cancer Research, Nanjing Medical University Affiliated Cancer Hospital, Jiangsu Key Laboratory of Molecular and Translational Cancer Research, 210029, Nanjing, China. xulin83@vip.sina.com.
Hongbing ShenDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, 211116, Nanjing, China. hbshen@njmu.edu.cn.
Nanjing Medical University · CNJiangsu Cancer Hospital · CNShanghai Jiao Tong University · CNShanghai Cell Therapy Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chinese lung cancer patients have distinct epidemiologic and genomic features, highlighting the presence of specific etiologic mechanisms other than smoking. Here, we present a comprehensive genomic landscape of 149 non-small cell lung cancer (NSCLC) cases and identify 15 potential driver genes. We reveal that Chinese patients are specially characterized by not only highly clustered EGFR mutations but a mutational signature (MS3, 33.7%), that is associated with inflammatory tumor-infiltrating B lymphocytes (P = 0.001). The EGFR mutation rate is significantly increased with the proportion of the MS3 signature (P = 9.37 × 10

Indexed as

AdultAgedAged, 80 and overAsian PeopleCarcinoma, Non-Small-Cell LungChinaErbB ReceptorsFemaleGenomicsHumansLung NeoplasmsMaleMiddle AgedMutationTumor MicroenvironmentWhole Genome SequencingErbB Receptors

Identifiers

PMID29799009
PMCPMC5967326
OpenAlexW2804413993

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.