Evidence map›Paper›PMID 29797682›Full record

ArticleAngewandte Chemie (International ed. in English)2018

Proteomic Analysis of Single Mammalian Cells Enabled by Microfluidic Nanodroplet Sample Preparation and Ultrasensitive NanoLC-MS.

Ying Zhu, Geremy Clair, William B Chrisler, Yufeng Shen, Rui Zhao, Anil K Shukla, Ronald J Moore, Ravi S Misra, Gloria S Pryhuber, Richard D Smith and 2 more

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 144 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
144citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

144 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Guideline
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  16. Review
  17. Article
  18. Mass Spectrometry-based Solutions for Single-cell Proteomics.Genomics, proteomics & bioinformatics · 2025
    Review
  19. Cell Population-resolved Multiomics Atlas of the Developing Lung.American journal of respiratory cell and molecular biology · 2025
    Article
  20. Article

84 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Ying ZhuEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0002-5416-0566
Geremy ClairBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0003-0478-8520
William B ChrislerBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.
Yufeng ShenBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.
Rui ZhaoEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.
Anil K ShuklaBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0001-8162-1543
Ronald J MooreBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.
Ravi S MisraDepartment of Pediatrics-Neonatology, University of Rochester Medical Center, Rochester, NY, 14642, USA.
Gloria S PryhuberDepartment of Pediatrics-Neonatology, University of Rochester Medical Center, Rochester, NY, 14642, USA.ORCID 0000-0002-9185-3994
Richard D SmithBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0002-2381-2349
Charles AnsongBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0001-5793-8559
Ryan T KellyEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.ORCID 0000-0002-3339-4443

Funding

The University of Rochester's Clinical and Translational Science InstituteUL1TR002001 · NCATS · UNIVERSITY OF ROCHESTER · PI WILSON, KAREN M., ZAND, MARTIN S · 2016 to 2024
$34.6M
Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
The University of Rochester's Clinical and Translational Science InstituteUL1TR000042 · NCATS · UNIVERSITY OF ROCHESTER · PI BENNETT, NANCY M, KIEBURTZ, KARL D. · 2012 to 2015
$14.4M
BioRepository for INvestigation of Diseases of the Lung (BRINDL) - Phase IIIU01HL148861 · NHLBI · UNIVERSITY OF ROCHESTER · PI GLORIA S PRYHUBER · 2019 to 2026
$9.7M
Biorepository for Investigation of Neonatal Diseases of Lung-Normal (BRINDL-NL)U01HL122700 · NHLBI · UNIVERSITY OF ROCHESTER · PI PRYHUBER, GLORIA S · 2014 to 2018
$6.1M
Center for Lung Development Imaging and OmicsU01HL122703 · NHLBI · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI ANSONG, CHARLES K, CARSON, JAMES PAUL · 2014 to 2018
$4.5M
Single Cell Resolution Omics Analysis of T1D isletsUC4DK108101 · NIDDK · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI ANSONG, CHARLES K, SUSSEL, LORI · 2015 to 2015
$2.9M
Area A: In-Depth Proteome Mapping of the Tumor Microenvironment with Single-Cell ResolutionR33CA225248 · NCI · BRIGHAM YOUNG UNIVERSITY · PI KELLY, RYAN T · 2017 to 2017
$1.7M
High-throughput multidimensional bioseparations for next-generation proteomicsR21EB020976 · NIBIB · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI KELLY, RYAN T · 2016 to 2017
$400k
NCATS NIH HHS UL1 TR000042NCATS NIH HHS UL1 TR002001NCI NIH HHS R33 CA225248NHLBI NIH HHS U01 HL122700NHLBI NIH HHS U01 HL122703NHLBI NIH HHS U01 HL148861NIBIB NIH HHS R21 EB020976NIDDK NIH HHS UC4 DK108101NIGMS NIH HHS P41 GM103493
6 · The paper itself

Abstract

We report on the quantitative proteomic analysis of single mammalian cells. Fluorescence-activated cell sorting was employed to deposit cells into a newly developed nanodroplet sample processing chip, after which samples were analyzed by ultrasensitive nanoLC-MS. An average of circa 670 protein groups were confidently identified from single HeLa cells, which is a far greater level of proteome coverage for single cells than has been previously reported. We demonstrate that the single-cell proteomics platform can be used to differentiate cell types from enzyme-dissociated human lung primary cells and identify specific protein markers for epithelial and mesenchymal cells.

Indexed as

Chromatography, High Pressure LiquidHeLa CellsHumansLungMicrofluidicsNanotechnologyPrincipal Component AnalysisProteomeProteomicsTandem Mass SpectrometryProteomecell typingdropletsmicrofluidicssingle-cell proteomicsultrasensitive LC-MS

Identifiers

PMID29797682
PMCPMC6261339

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.