Evidence map›Paper›PMID 29795654›Full record

ArticlePloS one2018

The characteristic patterns of neuronal avalanches in mice under anesthesia and at rest: An investigation using constrained artificial neural networks.

Erik D Fagerholm, Martin Dinov, Thomas Knöpfel, Robert Leech

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Erik D FagerholmCentre for Neuroimaging Sciences, King's College London, London, United Kingdom.ORCID 0000-0003-2973-1395
Martin DinovThe Computational, Cognitive and Clinical Neuroimaging Laboratory, The Centre for Neuroscience, The Division of Brain Sciences, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom.ORCID 0000-0003-3644-0115
Thomas KnöpfelCentre for Neurotechnology, Institute of Biomedical Engineering, Imperial College London, South Kensington Campus, London, United Kingdom.
Robert LeechCentre for Neuroimaging Sciences, King's College London, London, United Kingdom.

Funding

Sparse, Strong and Large Area Targeting of Genetically Encoded IndicatorsU01MH109091 · NIMH · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI ANTIC, SRDJAN D, KNOPFEL, THOMAS · 2015 to 2017
$1.6M
Medical Research Council MR/R005370/1NIMH NIH HHS U01 MH109091
6 · The paper itself

Abstract

Local perturbations within complex dynamical systems can trigger cascade-like events that spread across significant portions of the system. Cascades of this type have been observed across a broad range of scales in the brain. Studies of these cascades, known as neuronal avalanches, usually report the statistics of large numbers of avalanches, without probing the characteristic patterns produced by the avalanches themselves. This is partly due to limitations in the extent or spatiotemporal resolution of commonly used neuroimaging techniques. In this study, we overcome these limitations by using optical voltage (genetically encoded voltage indicators) imaging. This allows us to record cortical activity in vivo across an entire cortical hemisphere, at both high spatial (~30um) and temporal (~20ms) resolution in mice that are either in an anesthetized or awake state. We then use artificial neural networks to identify the characteristic patterns created by neuronal avalanches in our data. The avalanches in the anesthetized cortex are most accurately classified by an artificial neural network architecture that simultaneously connects spatial and temporal information. This is in contrast with the awake cortex, in which avalanches are most accurately classified by an architecture that treats spatial and temporal information separately, due to the increased levels of spatiotemporal complexity. This is in keeping with reports of higher levels of spatiotemporal complexity in the awake brain coinciding with features of a dynamical system operating close to criticality.

Indexed as

AnesthesiaModels, NeurologicalNeural Networks, ComputerAction PotentialsAnimalsCerebral CortexMiceMicroelectrodesNeuronsRestWakefulness

Identifiers

PMID29795654
PMCPMC5967741

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.