Evidence map›Paper›PMID 29793968›Full record

ArticleJournal of clinical microbiology2018

Comparison of Detection Limits of Fourth- and Fifth-Generation Combination HIV Antigen-Antibody, p24 Antigen, and Viral Load Assays on Diverse HIV Isolates.

Mars Stone, John Bainbridge, Ana M Sanchez, Sheila M Keating, Andrea Pappas, Wes Rountree, Chris Todd, Sonia Bakkour, Mark Manak, Sheila A Peel and 11 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. HIV Diagnostics and Vaccines: It Takes Two to Tango.The Journal of infectious diseases · 2024
    Review
  16. Article
  17. Article
  18. Article
  19. Drug resistance in children and adolescents with HIV in Panama.The Journal of antimicrobial chemotherapy · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 2 countries.

Mars StoneBlood Systems Research Institute, San Francisco, California, USA mstone@bloodsystems.org.ORCID 0000-0001-5619-2767
John BainbridgeDuke Human Vaccine Institute, Duke University Medical Center, Durham, North Carolina, USA.
Ana M SanchezDuke Human Vaccine Institute, Duke University Medical Center, Durham, North Carolina, USA.
Sheila M KeatingBlood Systems Research Institute, San Francisco, California, USA.
Andrea PappasDuke Human Vaccine Institute, Duke University Medical Center, Durham, North Carolina, USA.
Wes RountreeDuke Human Vaccine Institute, Duke University Medical Center, Durham, North Carolina, USA.
Chris ToddDuke Human Vaccine Institute, Duke University Medical Center, Durham, North Carolina, USA.
Sonia BakkourBlood Systems Research Institute, San Francisco, California, USA.
Mark ManakHenry M. Jackson Foundation, Silver Spring, Maryland, USA.ORCID 0000-0002-9217-9129
Sheila A PeelMHRP, Walter Reed Army Institute of Research (WRAIR), Silver Spring, Maryland, USA.
Robert W CoombsDepartment of Laboratory Medicine, University of Washington, Seattle, Washington, USA.
Eric M RamosDepartment of Laboratory Medicine, University of Washington, Seattle, Washington, USA.
M Kathleen ShriverBio-Rad Laboratories, Redmond, Washington, USA.
Paul ContestableOrtho Clinical Diagnostics, Rochester, New York, USA.
Sangeetha Vijaysri NairHologic, Inc., San Diego, California, USA.
David H WilsonQuanterix, Lexington, Massachusetts, USA.
Martin StengelinMesoScale Discovery, Rockville, Maryland, USA.
Gary MurphyPublic Health England, London, United Kingdom.
Indira HewlettCenter for Biologic Evaluation and Research (CBER), U.S. Food and Drug Administration (FDA), Bethesda, Maryland, USA.
Thomas N DennyDuke Human Vaccine Institute, Duke University Medical Center, Durham, North Carolina, USA.
Michael P BuschBlood Systems Research Institute, San Francisco, California, USA.
Duke Medical Center · USUniversity of California, San Francisco · USUniversity of Washington · USBio-Rad (United States) · USCenter for Biologics Evaluation and Research · USHenry M. Jackson Foundation · USHologic (United States) · USMeso Scale Discovery (United States) · USOrtho Clinical Diagnostics (United States) · USPublic Health England · GBQuanterix (United States) · USWalter Reed Army Institute of Research · US

Funding

Validation, CLIA and Qualification (VQC): Enhancing the RS ratio as a tool for AIDS Clinical Trial Group (ACTG) tuberculosis trialsUM1AI106701 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Grace M Aldrovandi · 2014 to 2026
$116.8M
University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Kenneth Sherr · 1988 to 2026
$104.9M
NIAID NIH HHS HHSN272200800014CNIAID NIH HHS P30 AI027757NIAID NIH HHS UM1 AI106701NIH HHS HHSN272201700061C
6 · The paper itself

Abstract

Detection of acute HIV infection is critical for HIV public health and diagnostics. Clinical fourth-generation antigen (Ag)/antibody (Ab) combination (combo) and p24 Ag immunoassays have enhanced detection of acute infection compared to Ab-alone assays but require ongoing evaluation with currently circulating diverse subtypes. Genetically and geographically diverse HIV clinical isolates were used to assess clinical HIV diagnostic, blood screening, and next-generation assays. Three-hundred-member panels of 20 serially diluted well-characterized antibody-negative HIV isolates for which the researchers were blind to the results (blind panels) were distributed to manufacturers and end-user labs to assess the relative analytic sensitivity of currently approved and preapproved clinical HIV fourth-generation Ag/Ab combo or p24 Ag-alone immunoassays for the detection of diverse subtypes. The limits of detection (LODs) of virus were estimated for different subtypes relative to confirmed viral loads. Analysis of immunoassay sensitivity was benchmarked against confirmed viral load measurements on the blind panel. On the basis of the proportion of positive results on 300 observations, all Ag/Ab combo and standard sensitivity p24 Ag assays performed similarly and within half-log LODs, illustrating the similar breadth of reactivity and diagnostic utility. Ultrasensitive p24 Ag assays achieved dramatically increased sensitivities, while the rapid combo assays performed poorly. The similar performance of the different commercially available fourth-generation assays on diverse subtypes supports their use in broad geographic settings with locally circulating HIV clades and recombinant strains. Next-generation preclinical ultrasensitive p24 Ag assays achieved dramatically improved sensitivity, while rapid fourth-generation assays performed poorly for p24 Ag detection.

Indexed as

AIDS SerodiagnosisBenchmarkingHIVHIV AntibodiesHIV AntigensHIV Core Protein p24HIV InfectionsHumansImmunoassayLimit of DetectionSensitivity and SpecificityViral LoadHIV AntibodiesHIV AntigensHIV Core Protein p24Ag/Ab comboAg detectionanalytic sensitivitydiagnosticsHIVultrasensitive Agviral load

Identifiers

PMID29793968
PMCPMC6062817
OpenAlexW2804049532

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.