Evidence map›Paper›PMID 29793958›Full record

ArticleJournal of virology2018

SAMHD1 Impairs HIV-1 Gene Expression and Negatively Modulates Reactivation of Viral Latency in CD4

Jenna M Antonucci, Sun Hee Kim, Corine St Gelais, Serena Bonifati, Tai-Wei Li, Olga Buzovetsky, Kirsten M Knecht, Alice A Duchon, Yong Xiong, Karin Musier-Forsyth and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jenna M AntonucciCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Sun Hee KimCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Corine St GelaisCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Serena BonifatiCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Tai-Wei LiCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Olga BuzovetskyDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA.
Kirsten M KnechtDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA.
Alice A DuchonCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Yong XiongDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA.
Karin Musier-ForsythCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA.
Li WuCenter for Retrovirus Research, The Ohio State University, Columbus, Ohio, USA wu.840@osu.edu.ORCID https://orcid.org/0000-0002-5468-2487
The Ohio State University · USYale University · US

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
PREDOCTORAL PROGRAM IN BIOPHYSICST32GM008283 · NIGMS · YALE UNIVERSITY · PI XIONG, YONG · 1988 to 2022
$10.5M
Cellular Factors Critical for Initiation of HIV-1 Reverse TranscriptionR01GM113887 · NIGMS · OHIO STATE UNIVERSITY · PI MUSIER-FORSYTH, KARIN M · 2014 to 2019
$1.7M
Mechanisms of SAMHD1-mediated HIV-1 restriction in dendritic cellsR01AI104483 · NIAID · OHIO STATE UNIVERSITY · PI WU, LI · 2013 to 2016
$1.5M
Mechanisms of HIV-1 RNA Methylation in Regulating Viral ReplicationR01GM128212 · NIGMS · OHIO STATE UNIVERSITY · PI WU, LI · 2017 to 2018
$831k
HIV-1 Nef Interaction with Nef-associated Factor 1 Regulates Viral LatencyR01AI120209 · NIAID · OHIO STATE UNIVERSITY · PI WU, LI · 2015 to 2017
$600k
Mechanism of Human LysRS/tRNALys Primer Recruitment and Packaging Into HIV-1F31GM119178 · NIGMS · OHIO STATE UNIVERSITY · PI DUCHON, ALICE ANN · 2015 to 2016
$69k
NIAID NIH HHS R01 AI104483NIAID NIH HHS R01 AI120209NIGMS NIH HHS F31 GM119178NIGMS NIH HHS R01 GM113887NIGMS NIH HHS R01 GM128212NIGMS NIH HHS T32 GM007223NIGMS NIH HHS T32 GM008283
6 · The paper itself

Abstract

Sterile alpha motif and HD domain-containing protein 1 (SAMHD1) restricts human immunodeficiency virus type 1 (HIV-1) replication in nondividing cells by degrading intracellular deoxynucleoside triphosphates (dNTPs). SAMHD1 is highly expressed in resting CD4

Indexed as

Amino Acid SubstitutionCD4-Positive T-LymphocytesGene Expression Regulation, ViralHEK293 CellsHIV-1HIV Long Terminal RepeatHumansJurkat CellsMutation, MissenseSAM Domain and HD Domain-Containing Protein 1THP-1 CellsTranscription, GeneticVirus LatencySAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humangene expressionHIV-1latencyLTRreactivationSAMHD1

Identifiers

PMID29793958
PMCPMC6052313
OpenAlexW2803637146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.