Evidence map›Paper›PMID 29792687›Full record

ArticleBiochemistry2018

Comobility of GABARAP and Phosphatidylinositol 4-Kinase 2A on Cytoplasmic Vesicles.

Yan Chen, Hui-Qiao Sun, John P Eichorst, Joseph P Albanesi, Helen Yin, Joachim D Mueller

Abstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yan ChenSchool of Physics and Astronomy , University of Minnesota , Minneapolis , Minnesota 55455 , United States.ORCID 0000-0002-0900-8338
Hui-Qiao Sun
John P EichorstSchool of Physics and Astronomy , University of Minnesota , Minneapolis , Minnesota 55455 , United States.
Joseph P AlbanesiORCID 0000-0002-6864-8140
Helen Yin
Joachim D MuellerSchool of Physics and Astronomy , University of Minnesota , Minneapolis , Minnesota 55455 , United States.
The University of Texas Southwestern Medical Center · USUniversity of Minnesota · US

Funding

In vivo Fluorescence Fluctuation Spectroscopy - Administrative SupplementR01GM064589 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI MUELLER, JOACHIM D · 2002 to 2019
$4.6M
PI4KIIα in Late Stage AutophagyR01GM121536 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI ALBANESI, JOSEPH P, MUELLER, JOACHIM D · 2017 to 2020
$1.5M
NIGMS NIH HHS R01 GM064589NIGMS NIH HHS R01 GM121536
6 · The paper itself

Abstract

We previously reported that recruitment of the type IIA phosphatidylinositol 4-kinase (PI4K2A) to autophagosomes by GABARAP, a member of the Atg8 family of autophagy-related proteins, is important for autophagosome-lysosome fusion. Because both PI4K2A and GABARAP have also been implicated in the intracellular trafficking of plasma membrane receptors in the secretory/endocytic pathway, we characterized their interaction in cells under nonautophagic conditions. Fluorescence fluctuation spectroscopy measurements revealed that GABARAP exists predominantly as a cytosolic monomer in live cells, but is recruited to small cytoplasmic vesicles upon overexpression of PI4K2A. C-Terminal lipidation of GABARAP, which is essential for its autophagic activities, is not necessary for its recruitment to these PI4K2A-containing transport vesicles. However, a GABARAP truncation mutant lacking C-terminal residues 103-117 fails to bind to PI4K2A, is not recruited to cytoplasmic vesicles, and does not codistribute with PI4K2A on subcellular organelles. These observations suggest that the PI4K2A-GABARAP interaction plays a role in membrane trafficking both under autophagic and nonautophagic conditions.

Indexed as

Protein Interaction MapsAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsAutophagyCytoplasmic VesiclesHeLa CellsHumansMicrotubule-Associated ProteinsMinor Histocompatibility AntigensPhosphotransferases (Alcohol Group Acceptor)Adaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsGABARAP protein, humanMicrotubule-Associated ProteinsMinor Histocompatibility Antigensphosphatidylinositol phosphate 4-kinasePhosphotransferases (Alcohol Group Acceptor)

Identifiers

PMID29792687
PMCPMC6317706
OpenAlexW2803370664

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.