Evidence map›Paper›PMID 29791854›Full record

ArticleCell reports2018

Nup133 Is Required for Proper Nuclear Pore Basket Assembly and Dynamics in Embryonic Stem Cells.

Benoit Souquet, Ellen Freed, Alessandro Berto, Vedrana Andric, Nicolas Audugé, Bernardo Reina-San-Martin, Elizabeth Lacy, Valérie Doye

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Advances in the understanding of nuclear pore complexes in human diseases.Journal of cancer research and clinical oncology · 2024
    Review
  7. Nuclear transport proteins: structure, function, and disease relevance.Signal transduction and targeted therapy · 2023
    Review
  8. Article
  9. Review
  10. The LEM-ESCRT toolkit: Repair and maintenance of the nucleus.Frontiers in cell and developmental biology · 2022
    Review
  11. Review
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Benoit SouquetInstitut Jacques Monod, UMR7592 CNRS-Université Paris Diderot, Sorbonne Paris Cité, F-75205 Paris, France.
Ellen FreedDevelopmental Biology Program, Memorial Sloan Kettering, New York, NY 10065, USA.
Alessandro BertoInstitut Jacques Monod, UMR7592 CNRS-Université Paris Diderot, Sorbonne Paris Cité, F-75205 Paris, France; Ecole Doctorale SDSV, Université Paris Sud, F-91405 Orsay, France.
Vedrana AndricInstitut Jacques Monod, UMR7592 CNRS-Université Paris Diderot, Sorbonne Paris Cité, F-75205 Paris, France.
Nicolas AudugéInstitut Jacques Monod, UMR7592 CNRS-Université Paris Diderot, Sorbonne Paris Cité, F-75205 Paris, France.
Bernardo Reina-San-MartinInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), 67404 Illkirch, France; Inserm U 1258, 67404 Illkirch, France; CNRS UMR 7104, 67404 Illkirch, France; Université de Strasbourg (UDS), 67404 Illkirch, France.
Elizabeth LacyDevelopmental Biology Program, Memorial Sloan Kettering, New York, NY 10065, USA. Electronic address: e-lacy@ski.mskcc.org.
Valérie DoyeInstitut Jacques Monod, UMR7592 CNRS-Université Paris Diderot, Sorbonne Paris Cité, F-75205 Paris, France. Electronic address: valerie.doye@ijm.fr.
Memorial Sloan Kettering Cancer Center · USSorbonne Paris Cité · FRDélégation Paris 7 · FRInstitut de génétique et de biologie moléculaire et cellulaire · FRUniversité Paris Cité · FRUniversité Paris-Sud · FR

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Acquisition of a DeltaVision OMX SR 3D SIM system for super-resolution imagingS10RR031855 · NCRR · ROCKEFELLER UNIVERSITY · PI NORTH, ALISON JANE · 2011 to 2011
$600k
NCI NIH HHS P30 CA008748NCRR NIH HHS S10 RR031855
6 · The paper itself

Abstract

Nup133 belongs to the Y-complex, a key component of the nuclear pore complex (NPC) scaffold. Studies on a null mutation in mice previously revealed that Nup133 is essential for embryonic development but not for mouse embryonic stem cell (mESC) proliferation. Using single-pore detection and average NE-fluorescence intensity, we find that Nup133 is dispensable for interphase and postmitotic NPC scaffold assembly in pluripotent mESCs. However, loss of Nup133 specifically perturbs the formation of the nuclear basket as manifested by the absence of Tpr in about half of the NPCs combined with altered dynamics of Nup153. We further demonstrate that its central domain mediates Nup133's role in assembling Tpr and Nup153 into a properly configured nuclear basket. Our findings thus revisit the role of the Y-complex in pore biogenesis and provide insights into the interplay between NPC scaffold architecture, nuclear basket assembly, and the generation of heterogeneity among NPCs.

Indexed as

AnimalsFemaleImaging, Three-DimensionalInterphaseMaleMiceMinor Histocompatibility AntigensMouse Embryonic Stem CellsNuclear PoreNuclear Pore Complex ProteinsProtein DomainsProto-Oncogene ProteinsMinor Histocompatibility AntigensNuclear Pore Complex ProteinsNUP133 protein, mouseNup153 protein, mouseProto-Oncogene ProteinsTPR protein, mousebiogenesisdynamicsmouse embryonic stem cellsNPC scaffoldnuclear basketnuclear porenucleoporinNup133Nup153Tpr

Identifiers

PMID29791854
PMCPMC5995580
OpenAlexW2803975202

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.