Evidence map›Paper›PMID 29790950›Full record

ArticleGigaScience2018

The research data management platform (RDMP): A novel, process driven, open-source tool for the management of longitudinal cohorts of clinical data.

Thomas Nind, James Galloway, Gordon McAllister, Donald Scobbie, Wilfred Bonney, Christopher Hall, Leandro Tramma, Parminder Reel, Martin Groves, Philip Appleby and 3 more

Open access · goldAbstract read
In one paragraph

Article in GigaScience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  5. A National Network of Safe Havens: Scottish Perspective.Journal of medical Internet research · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Thomas NindHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
James GallowayHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Gordon McAllisterHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Donald ScobbieEdinburgh Parallel Computing Centre, James Clerk Maxwell Building, Peter Guthrie Tait Road, Edinburgh, EH9 3FD, UK.
Wilfred BonneyHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Christopher HallHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Leandro TrammaHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Parminder ReelHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Martin GrovesHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Philip ApplebyHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Alex DoneyHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Bruce GuthrieHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
Emily JeffersonHealth Informatics Centre, University of Dundee, Mail Box 15, Ninewells Hospital & Medical School, Dundee, DD1 9SY, UK.
University of Dundee · GB

Funding

Medical Research Council MR/K007017/1Medical Research Council MR/M501633/1
6 · The paper itself

Abstract

Background: The Health Informatics Centre at the University of Dundee provides a service to securely host clinical datasets and extract relevant data for anonymized cohorts to researchers to enable them to answer key research questions. As is common in research using routine healthcare data, the service was historically delivered using ad-hoc processes resulting in the slow provision of data whose provenance was often hidden to the researchers using it. This paper describes the development and evaluation of the Research Data Management Platform (RDMP): an open source tool to load, manage, clean, and curate longitudinal healthcare data for research and provide reproducible and updateable datasets for defined cohorts to researchers. Results: Between 2013 and 2017, RDMP tool implementation tripled the productivity of data analysts producing data releases for researchers from 7.1 to 25.3 per month and reduced the error rate from 12.7% to 3.1%. The effort on data management reduced from a mean of 24.6 to 3.0 hours per data release. The waiting time for researchers to receive data after agreeing a specification reduced from approximately 6 months to less than 1 week. The software is scalable and currently manages 163 datasets. A total 1,321 data extracts for research have been produced, with the largest extract linking data from 70 different datasets. Conclusions: The tools and processes that encompass the RDMP not only fulfil the research data management requirements of researchers but also support the seamless collaboration of data cleaning, data transformation, data summarization and data quality assessment activities by different research groups.

Indexed as

Computer SystemsLongitudinal StudiesDatabases, FactualHumansInternetMedical InformaticsProgramming LanguagesQuality ControlReproducibility of ResultsResearchScotlandSoftwareUniversities

Identifiers

PMID29790950
PMCPMC6041881
OpenAlexW2803125402

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.