Evidence map›Paper›PMID 29790428›Full record

ArticlePharmacogenomics2018

Multi-ethnic SULT1A1 copy number profiling with multiplex ligation-dependent probe amplification.

Raymon Vijzelaar, Mariana R Botton, Lisette Stolk, Suparna Martis, Robert J Desnick, Stuart A Scott

Abstract read
In one paragraph

Article in Pharmacogenomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Genetic Variation inJournal of personalized medicine · 2026
    Article
  2. Review
  3. Genes · 2026
    Article
  4. Review
  5. Article
  6. Copy number variations of cytochromeAsian biomedicine : research, reviews and news · 2023
    Article
  7. Article
  8. Simple and Robust Detection ofPharmaceuticals (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Article
  11. Sulfation pathways from red to green.The Journal of biological chemistry · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Raymon VijzelaarMRC-Holland, Willem Schoutenstraat 1, Amsterdam, The Netherlands.
Mariana R BottonDepartment of Genetics & Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Lisette StolkMRC-Holland, Willem Schoutenstraat 1, Amsterdam, The Netherlands.
Suparna MartisDepartment of Genetics & Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Robert J DesnickDepartment of Genetics & Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Stuart A ScottDepartment of Genetics & Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

Funding

The Pharmacogenomic Control of Clopidogrel Response in Acute Coronary SyndromesK23GM104401 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SCOTT, STUART ALEXANDER · 2013 to 2016
$778k
NIGMS NIH HHS K23 GM104401
6 · The paper itself

Abstract

aimTo develop a SULT1A1 multiplex ligation-dependent probe amplification assay and to investigate multi-ethnic copy number variant frequencies.

methodsA novel multiplex ligation-dependent probe amplification assay was developed and tested on 472 African-American, Asian, Caucasian, Hispanic and Ashkenazi Jewish individuals.

resultsThe frequencies of atypical total copy number (i.e., greater or less than two) were 38.7% for Hispanics, 38.9% for Ashkenazi Jewish, 43.2% for Caucasians, 53.6% for Asians and 64.1% for African-Americans. Heterozygous SULT1A1 deletion carriers (slow sulfators) were most common among Caucasians (8.4%), whereas African-Americans had the highest frequencies of three or more copies (rapid sulfators; 60.9%).

conclusionDifferent ethnic and racial populations have varying degrees of SULT1A1-mediated sulfation activity, which warrants further research and that may have utility for drug response prediction among SULT1A1-metabolized medications.

Indexed as

AllelesArylsulfotransferaseDNA Copy Number VariationsEthnicityHumansMultiplex Polymerase Chain ReactionSequence DeletionArylsulfotransferaseSULT1A1 protein, humancopy number variationmultiplex ligation-dependent probe amplification (MLPA)pharmacogeneticspharmacogenomicsSULT1A1

Identifiers

PMID29790428
PMCPMC6021911

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.