Evidence map›Paper›PMID 29789582›Full record

ArticleEmerging microbes & infections2018

The concordance between upper and lower respiratory microbiota in children with Mycoplasma pneumoniae pneumonia.

Wenkui Dai, Heping Wang, Qian Zhou, Xin Feng, Zhiwei Lu, Dongfang Li, Zhenyu Yang, Yanhong Liu, Yinhu Li, Gan Xie and 4 more

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 4 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 4 syntheses or guidelines pooled it, 44 citations in OpenAlex.

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  4. The association between bacteria colonizing the upper respiratory tract and lower respiratory tract infection in young children: a systematic review and meta-analysis.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Wenkui DaiDepartment of Computer Science, City University of Hong Kong, 999077, Hong Kong, China.
Heping WangDepartment of Respiratory Diseases, Shenzhen Children's Hospital, No. 7019, Yitian Road, 518026, Futian District, Shenzhen, China.
Qian ZhouDepartment of Microbial Research, WeHealthGene Institute, 3C19, No. 19 Building, 518000, Dayun Software Town, Shenzhen, China.
Xin FengDepartment of Microbial Research, WeHealthGene Institute, 3C19, No. 19 Building, 518000, Dayun Software Town, Shenzhen, China.
Zhiwei LuDepartment of Respiratory Diseases, Shenzhen Children's Hospital, No. 7019, Yitian Road, 518026, Futian District, Shenzhen, China.
Dongfang LiDepartment of Microbial Research, WeHealthGene Institute, 3C19, No. 19 Building, 518000, Dayun Software Town, Shenzhen, China.
Zhenyu YangDepartment of Microbial Research, WeHealthGene Institute, 3C19, No. 19 Building, 518000, Dayun Software Town, Shenzhen, China.
Yanhong LiuDepartment of Microbial Research, WeHealthGene Institute, 3C19, No. 19 Building, 518000, Dayun Software Town, Shenzhen, China.
Yinhu LiDepartment of Microbial Research, WeHealthGene Institute, 3C19, No. 19 Building, 518000, Dayun Software Town, Shenzhen, China.
Gan XieDepartment of Respiratory Diseases, Shenzhen Children's Hospital, No. 7019, Yitian Road, 518026, Futian District, Shenzhen, China.
Kunling ShenDepartment of Respiratory Diseases, Beijing Children's Hospital, 100045, Beijing, China.
Yonghong YangDepartment of Respiratory Diseases, Shenzhen Children's Hospital, No. 7019, Yitian Road, 518026, Futian District, Shenzhen, China.
Yuejie ZhengDepartment of Respiratory Diseases, Shenzhen Children's Hospital, No. 7019, Yitian Road, 518026, Futian District, Shenzhen, China. shine1990@sina.com.
Shuaicheng LiDepartment of Computer Science, City University of Hong Kong, 999077, Hong Kong, China. shuaicli@cityu.edu.hk.
Shenzhen Children's Hospital · CNCity University of Hong Kong · HKBeijing Children’s Hospital · CNNankai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, the morbidity of Mycoplasma pneumoniae pneumonia (MPP) has dramatically increased in China. An increasing number of studies indicate that an imbalance in the respiratory microbiota is associated with respiratory infection. We selected 28 hospitalized patients infected with M. pneumoniae and 32 healthy children. Nasopharyngeal (NP) and oropharyngeal (OP) swabs were collected from healthy children, whereas NP, OP and bronchoalveolar lavage (BAL) specimens were collected from patients. Microbiota analysis was performed on all microbial samples using 16 S ribosomal RNA (16 S rRNA) sequencing. The NP microbial samples in healthy children were divided into two groups, which were dominated by either Staphylococcus or mixed microbial components. The respiratory microbiota in pneumonia patients harbored a lower microbial diversity compared to healthy children, and both the NP and OP microbiota of patients differed significantly from that of healthy children. Hospitalized MPP children with a higher abundance of Mycoplasma in the BAL fluid (BALF) microbiota tended to suffer longer hospitalization lengths and higher peak fevers and serum C-reactive protein levels. Concordance analysis explained the succession of imbalanced NP microbiota to the OP and lung in diseased children. However, the association of the abundance of Mycoplasma in BALF microbiota with that in NP or OP microbiota varied among individuals, which suggested the sensitivity of BALF in MPP diagnostics, mirroring MPP severity.

Indexed as

Base SequenceBronchoalveolar Lavage FluidChildChild, PreschoolChinaC-Reactive ProteinDNA, BacterialFemaleHumansInfantMaleMicrobiotaMycoplasma pneumoniaeNasopharynxOropharynxPneumonia, MycoplasmaC-Reactive ProteinDNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID29789582
PMCPMC5964150
OpenAlexW2806674978

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.