Evidence map›Paper›PMID 29788237›Full record

ArticleJournal of Crohn's & colitis2018

Diagnostic Yield of Next-generation Sequencing in Very Early-onset Inflammatory Bowel Diseases: A Multicentre Study.

Fabienne Charbit-Henrion, Marianna Parlato, Sylvain Hanein, Rémi Duclaux-Loras, Jan Nowak, Bernadette Begue, Sabine Rakotobe, Julie Bruneau, Cécile Fourrage, Olivier Alibeu and 59 more

Erratum issuedAbstract readMulticenter Study
In one paragraph

Article in Journal of Crohn's & colitis, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 55 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. A Systematic Review of Monogenic Inflammatory Bowel Disease.Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association · 2022
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Mastering genetics for your clinic: A step-by-step guide.The Journal of allergy and clinical immunology · 2025
    Review
  10. Monogenic inflammatory bowel disease: An unfolding enigma.World journal of clinical pediatrics · 2025
    Review
  11. Review
  12. Article
  13. Article
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  18. Review
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

69 authors.

Fabienne Charbit-HenrionINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Marianna ParlatoINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Sylvain HaneinINSERM, UMR 1163 Translational Genetic, and Imagine Institute, Paris, France.
Rémi Duclaux-LorasINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Jan NowakINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Bernadette BegueINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Sabine RakotobeINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Julie BruneauUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Cécile FourrageUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Olivier AlibeuUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Frédéric Rieux-LaucatUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Eva LévyUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Marie-Claude StolzenbergUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Fabienne MazerollesUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Sylvain LatourUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Christelle LenoirUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Alain FischerUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Capucine PicardUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Marina AloiGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Jorge Amil DiasGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Mongi Ben HarizGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Anne BourrierDepartment of Gastroenterology, Hôpital St Antoine, Assistance Publique-Hôpitaux de Paris, Paris, France.
Christian BreuerGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Anne BretonGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Jiri BronskyGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Stephan BuderusGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Mara CananziGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Stéphanie CoopmanGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Clara CrémilleuxGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Alain DabadieGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Clémentine Dumant-ForestGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Odul Egritas GurkanGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Alexandre FabreGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Aude FischerGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Marta German DiazGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Yago Gonzalez-LamaInflammatory Bowel Disease Unit, Hospital Universitario Puerta de Hierro-Majadahonda, Madrid, Spain.
Olivier GouletUniversité Paris Descartes-Sorbonne Paris Cité, Paris, France.
Graziella GuarisoGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Neslihan GurcanGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Matjaz HomanGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Jean-Pierre HugotGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Eric JeziorskiGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Evi KaranikaGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Alain LachauxGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Peter LewindonGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Rosa LimaGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Fernando MagroGastroenterology Department, Hospital de São João, Institute of Pharmacology and Therapeutics Faculty of Medicine and MedInUP - Centre for Drug Discovery and Innovative Medicines, University of Porto, Porto, Portugal.
Janos MajorGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Georgia MalamutINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Emmanuel MasGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Istvan MattyusGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Luisa M MearinGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Jan MelekGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Victor Manuel Navas-LopezGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Anders PaerregaardGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Cecile PelatanGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Bénédicte PigneurINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Isabel Pinto PaisGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Julie RebeuhGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Claudio RomanoGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Nadia SialaGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Caterina StrisciuglioGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Michela Tempia-CalieraGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Patrick TounianGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Dan TurnerGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Vaidotas UrbonasGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Stéphanie WillotGENIUS Group [GENetically ImmUne-mediated enteropathieS] from the European Society for Paediatric Gastroenterology, Hepatology and Nutrition [ESPGHAN].
Frank M RuemmeleINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.
Nadine Cerf-BensussanINSERM, UMR1163, Laboratory of Intestinal Immunity, and Imagine Institute, Paris, France.

Funding

European Research Council 339407
6 · The paper itself

Abstract

BACKGROUND AND

aimsAn expanding number of monogenic defects have been identified as causative of severe forms of very early-onset inflammatory bowel diseases [VEO-IBD]. The present study aimed at defining how next-generation sequencing [NGS] methods can be used to improve identification of known molecular diagnosis and to adapt treatment.

methodsA total of 207 children were recruited in 45 paediatric centres through an international collaborative network [ESPGHAN GENIUS working group] with a clinical presentation of severe VEO-IBD [n = 185] or an anamnesis suggestive of a monogenic disorder [n = 22]. Patients were divided at inclusion into three phenotypic subsets: predominantly small bowel inflammation, colitis with perianal lesions, and colitis only. Methods to obtain molecular diagnosis included functional tests followed by specific Sanger sequencing, custom-made targeted NGS, and in selected cases whole exome sequencing [WES] of parents-child trios. Genetic findings were validated clinically and/or functionally.

resultsMolecular diagnosis was achieved in 66/207 children [32%]: 61% with small bowel inflammation, 39% with colitis and perianal lesions, and 18% with colitis only. Targeted NGS pinpointed gene mutations causative of atypical presentations, and identified large exonic copy number variations previously missed by WES.

conclusionsOur results lead us to propose an optimised diagnostic strategy to identify known monogenic causes of severe IBD.

Indexed as

High-Throughput Nucleotide SequencingAdolescentAge of OnsetChildChild, PreschoolCohort StudiesFemaleHumansInfantInflammatory Bowel DiseasesMalePredictive Value of TestsGenetics and molecular epidemiologymonogenic disorderspaediatricsTNGSVEO-IBD

Identifiers

PMID29788237
PMCPMC6113703

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.