Evidence map›Paper›PMID 29785006›Full record

ReviewJournal of human genetics2018

The era of immunogenomics/immunopharmacogenomics.

Makda Zewde, Kazuma Kiyotani, Jae-Hyun Park, Hua Fang, Kai Lee Yap, Poh Yin Yew, Houda Alachkar, Taigo Kato, Tu H Mai, Yuji Ikeda and 6 more

Abstract readReview
PubMed Publisher
In one paragraph

Review in Journal of human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Genophenotypic Factors and Pharmacogenomics in Adverse Drug Reactions.International journal of molecular sciences · 2021
    Review
  4. Immunogenomics in personalized cancer treatments.Journal of human genetics · 2021
    Review
  5. Review
  6. Review
  7. Biological Factors behind Melanoma Response to Immune Checkpoint Inhibitors.International journal of molecular sciences · 2020
    Review
  8. Article
  9. Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 2 countries.

Makda ZewdeSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Kazuma KiyotaniSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.ORCID http://orcid.org/0000-0002-9236-9061
Jae-Hyun ParkSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Hua FangSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Kai Lee YapSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Poh Yin YewSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Houda AlachkarSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Taigo KatoSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Tu H MaiSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Yuji IkedaSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Tatsuo MatsudaSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Xiao LiuSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Lili RenSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Boya DengSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Makiko HaradaSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA.
Yusuke NakamuraSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, 60637, USA. ynakamura@bsd.uchicago.edu.
University of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although germline alterations and somatic mutations in disease cells have been extensively analyzed, molecular changes in immune cells associated with disease conditions have not been characterized in depth. It is clear that our immune system has a critical role in various biological and pathological conditions, such as infectious diseases, autoimmune diseases, drug-induced skin and liver toxicity, food allergy, and rejection of transplanted organs. The recent development of cancer immunotherapies, particularly drugs modulating the immune checkpoint molecules, has clearly demonstrated the importance of host immune cells in cancer treatments. However, the molecular mechanisms by which these new therapies kill tumor cells are still not fully understood. In this regard, we have begun to explore the role of newly developed tools such as next-generation sequencing in the genetic characterization of both cancer cells and host immune cells, a field that is called immunogenomics/ immunopharmacogenomics. This new field has enormous potential to help us better understand changes in our immune system during the course of various disease conditions. Here we report the potential of deep sequencing of T-cell and B-cell receptors in capturing the molecular contribution of the immune system, which we believe plays critical roles in the pathogenesis of various human diseases.

Indexed as

Immunogenetic PhenomenaPharmacogeneticsAutoimmune DiseasesGraft vs Host DiseaseHematopoietic Stem Cell TransplantationHumansImmunotherapy

Identifiers

PMID29785006
OpenAlexW2803215127

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.