Evidence map›Paper›PMID 29784950›Full record

ArticleScientific reports2018

Genome-wide association study identified new susceptible genetic variants in HLA class I region for hepatitis B virus-related hepatocellular carcinoma.

Hiromi Sawai, Nao Nishida, Seik-Soon Khor, Masao Honda, Masaya Sugiyama, Natsumi Baba, Kayoko Yamada, Norie Sawada, Shoichiro Tsugane, Kazuhiko Koike and 30 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. HLA-DQB1*03:01 and risk of HBV-related HCC.Hepatology (Baltimore, Md.) · 2026
    Article
  6. Article
  7. Article
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  10. Article
  11. Article
  12. Prediction Model withInternational journal of molecular sciences · 2023
    Article
  13. Review
  14. NovelFrontiers in immunology · 2023
    Article
  15. Article
  16. Evolutionary Origins of Metabolic Reprogramming in Cancer.International journal of molecular sciences · 2022
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 18 institutions in 3 countries.

Hiromi SawaiDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan. sawai@m.u-tokyo.ac.jp.
Nao NishidaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Seik-Soon KhorDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Masao HondaDepartment of Gastroenterology, Kanazawa University Graduate School of Medicine, Kanazawa, Japan.
Masaya SugiyamaGenome Medical Science Project, National Center for Global Health and Medicine, Ichikawa, Japan.
Natsumi BabaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Kayoko YamadaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Norie SawadaEpidemiology and Prevention Group, Center for Public Health Sciences, National Cancer Center, Tokyo, Japan.
Shoichiro TsuganeEpidemiology and Prevention Group, Center for Public Health Sciences, National Cancer Center, Tokyo, Japan.ORCID 0000-0003-4105-2774
Kazuhiko KoikeDepartment of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Yuji KondoDepartment of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Hiroshi YatsuhashiClinical Research Center, National Nagasaki Medical Center, Nagasaki, Japan.
Shinya NagaokaClinical Research Center, National Nagasaki Medical Center, Nagasaki, Japan.
Akinobu TaketomiDepartment of Gastroenterological Surgery I, Hokkaido University Graduate School of Medicine, Sapporo, Japan.
Moto FukaiDepartment of Gastroenterological Surgery I, Hokkaido University Graduate School of Medicine, Sapporo, Japan.
Masayuki KurosakiDivision of Gastroenterology and Hepatology, Musashino Red Cross Hospital, Tokyo, Japan.
Namiki IzumiDivision of Gastroenterology and Hepatology, Musashino Red Cross Hospital, Tokyo, Japan.
Jong-Hon KangCenter for Gastroenterology, Teine Keijinkai Hospital, Sapporo, Japan.
Kazumoto MurataGenome Medical Science Project, National Center for Global Health and Medicine, Ichikawa, Japan.
Keisuke HinoDepartment of Hepatology and Pancreatology, Kawasaki Medical School, Kurashiki, Japan.
Sohji NishinaDepartment of Hepatology and Pancreatology, Kawasaki Medical School, Kurashiki, Japan.
Akihiro MatsumotoDepartment of Medicine, Shinshu University School of Medicine, Matsumoto, Japan.
Eiji TanakaDepartment of Medicine, Shinshu University School of Medicine, Matsumoto, Japan.
Naoya SakamotoDepartment of Gastroenterology and Hepatology, Hokkaido University Faculty of Medicine, Sapporo, Japan.
Koji OgawaDepartment of Gastroenterology and Hepatology, Hokkaido University Faculty of Medicine, Sapporo, Japan.
Kazuhide YamamotoDepartment of Gastroenterology and Hepatology, Okayama University Graduate School of Medicine, Dentistry, and Pharmaceutical Sciences, Okayama, Japan.
Akihiro TamoriDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Osamu YokosukaDepartment of Gastroenterology and Nephrology, Graduate School of Medicine, Chiba University, Chiba, Japan.
Tatsuo KandaDepartment of Gastroenterology and Nephrology, Graduate School of Medicine, Chiba University, Chiba, Japan.ORCID 0000-0002-9565-4669
Isao SakaidaGastroenterology and Hepatology, Yamaguchi University Graduate School of Medicine, Yamaguchi, Japan.
Yoshito ItohMolecular Gastroenterology and Hepatology, Kyoto Prefectural University of Medicine, Kyoto, Japan.
Yuichiro EguchiLiver center, Saga University Hospital, Saga, Japan.
Satoshi OedaLiver center, Saga University Hospital, Saga, Japan.
Satoshi MochidaDivision of Gastroenterology and Hepatology, Saitama Medical University, Saitama, Japan.
Man-Fung YuenDepartment of Medicine and State Key Laboratory for Liver Research, The University of Hong Kong, Hong Kong, China.
Wai-Kay SetoDepartment of Medicine and State Key Laboratory for Liver Research, The University of Hong Kong, Hong Kong, China.
Yong PoovorawanCenter of Excellence in Clinical Virology, Department of Pediatrics, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.
Nawarat PosuwanCenter of Excellence in Clinical Virology, Department of Pediatrics, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.
Masashi MizokamiGenome Medical Science Project, National Center for Global Health and Medicine, Ichikawa, Japan.
Katsushi TokunagaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
The University of Tokyo · JPHokkaido University · JPNational Center for Global Health and Medicine · JPChiba University · JPChulalongkorn University · THKawasaki Medical School · JPMusashino Red Cross Hospital · JPNagasaki Medical Center · JPSaga University · JPShinshu University · JPUniversity of Hong Kong · HKKanazawa University · JPKyoto Prefectural University of Medicine · JPOkayama University · JPOsaka City University · JPSaitama Medical University · JPTeine Keijinkai Hospital · JPYamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have performed a genome-wide association study (GWAS) including 473 Japanese HBV (hepatitis B virus)-positive HCC (hepatocellular carcinoma) patients and 516 HBV carriers including chronic hepatitis and asymptomatic carrier individuals to identify new host genetic factors associated with HBV-derived HCC in Japanese and other East Asian populations. We identified 65 SNPs with P values < 10

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyPolymorphism, Single NucleotideCarcinoma, HepatocellularGenetic LociHepatitis B, ChronicHepatitis B virusHistocompatibility Antigens Class IHumansLiver NeoplasmsRisk FactorsHistocompatibility Antigens Class I

Identifiers

PMID29784950
PMCPMC5962604
OpenAlexW2747782741

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.