Evidence map›Paper›PMID 29784765›Full record

ArticlePlant physiology2018

DAWDLE Interacts with DICER-LIKE Proteins to Mediate Small RNA Biogenesis.

Shuxin Zhang, Yongchao Dou, Shengjun Li, Guodong Ren, David Chevalier, Chi Zhang, Bin Yu

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. What Do We Know about Barley miRNAs?International journal of molecular sciences · 2022
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  19. Interactions and links among the noncoding RNAs in plants under stresses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Shuxin ZhangState Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong 271018, China sxzhang@sdau.edu.cn byu3@unl.edu.ORCID 0000-0003-2577-0522
Yongchao DouCenter for Plant Science Innovation and School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588-0666.
Shengjun LiCenter for Plant Science Innovation and School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588-0666.ORCID 0000-0003-0469-3222
Guodong RenState Key Laboratory of Genetic Engineering and Collaborative Innovation Center for Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200438, China.ORCID 0000-0002-1895-7578
David ChevalierDepartment of Biological Sciences, East Georgia State College, Swainsboro, Georgia 30401.
Chi ZhangCenter for Plant Science Innovation and School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588-0666.
Bin YuCenter for Plant Science Innovation and School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588-0666 sxzhang@sdau.edu.cn byu3@unl.edu.ORCID 0000-0002-4763-177X
University of Nebraska–Lincoln · USEast Georgia State College · USFudan University · CNShandong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DAWDLE (DDL) is a conserved forkhead-associated (FHA) domain-containing protein with essential roles in plant development and immunity. It acts in the biogenesis of microRNAs (miRNAs) and endogenous small interfering RNAs (siRNAs), which regulate gene expression at the transcriptional and/or posttranscriptional levels. However, the functional mechanism of DDL and its impact on exogenous siRNAs remain elusive. Here, we report that DDL is required for the biogenesis of siRNAs derived from sense transgenes and inverted-repeat transgenes. Furthermore, we show that a mutation in the FHA domain of DDL disrupts the interaction of DDL with DICER-LIKE1 (DCL1), which is the enzyme that catalyzes miRNA maturation from primary miRNA transcripts (pri-miRNAs), resulting in impaired pri-miRNA processing. Moreover, we demonstrate that DDL interacts with DCL3, which is a DCL1 homolog responsible for siRNA production, and this interaction is crucial for optimal DCL3 activity. These results reveal that the interaction of DDL with DCLs is required for the biogenesis of miRNAs and siRNAs in Arabidopsis (

Indexed as

ArabidopsisArabidopsis ProteinsCarrier ProteinsCell Cycle ProteinsMicroRNAsMutationPlants, Genetically ModifiedProtein DomainsRibonuclease IIIRNA, Small InterferingTransgenesArabidopsis ProteinsCarrier ProteinsCell Cycle ProteinsDAWDLE protein, ArabidopsisDCL1 protein, ArabidopsisDCL3 protein, ArabidopsisDCL4 protein, ArabidopsisMicroRNAsRibonuclease IIIRNA, Small Interfering

Identifiers

PMID29784765
PMCPMC6053015
OpenAlexW2804379509

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.