Evidence map›Paper›PMID 29783172›Full record

ArticleJournal of chromatography. B, Analytical technologies in the biomedical and life sciences2018

Headspace sorptive extraction-gas chromatography-mass spectrometry method to measure volatile emissions from human airway cell cultures.

Mei S Yamaguchi, Mitchell M McCartney, Angela L Linderholm, Susan E Ebeler, Michael Schivo, Cristina E Davis

Abstract read
In one paragraph

Article in Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Defining VOC signatures of airway epithelial cells with PM2.5 exposure.Toxicological sciences : an official journal of the Society of Toxicology · 2025
    Article
  5. Review
  6. Discovery and Validation of a Volatile Signature of Eosinophilic Airway Inflammation in Asthma.American journal of respiratory and critical care medicine · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Thin film nanofibers containing ZnTiOMikrochimica acta · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Mei S YamaguchiMechanical and Aerospace Engineering, University of California Davis, Davis, CA 95616, USA.
Mitchell M McCartneyMechanical and Aerospace Engineering, University of California Davis, Davis, CA 95616, USA.
Angela L LinderholmCenter for Comparative Respiratory Biology and Medicine, UC Davis Medical School, Davis, CA 95616, USA.
Susan E EbelerViticulture and Enology, University of California Davis, One Shields Avenue, Davis, CA 95616, USA.
Michael SchivoDivision of Pulmonary and Critical Care Medicine, University of California Davis, Davis, CA 95616, USA.
Cristina E DavisMechanical and Aerospace Engineering, University of California Davis, Davis, CA 95616, USA. Electronic address: cedavis@ucdavis.edu.
University of California, Davis · US

Funding

UC Davis Environmental Health Sciences Core CenterP30ES023513 · NIEHS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Nicholas J. KENYON · 2015 to 2026
$26.0M
Revisiting ReCHARGE: ECHO Follow up on Middle Childhood and AdolescenceUH3OD023365 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Deborah Hall Bennett, Irva Hertz-Picciotto · 2018 to 2026
$21.9M
UC Davis Clinical and Translational Science CenterUL1TR000002 · NCATS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BERGLUND, LARS F · 2012 to 2015
$12.2M
TRAINING IN COMPARATIVE LUNG BIOLOGY AND MEDICINET32HL007013 · NHLBI · UNIVERSITY OF CALIFORNIA DAVIS · PI Elena Goncharova, Nicholas J. KENYON · 1985 to 2026
$10.1M
Revisiting ReCHARGE: ECHO Follow up on Middle Childhood and AdolescenceUG3OD023365 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BENNETT, DEBORAH HALL, HERTZ-PICCIOTTO, IRVA · 2016 to 2024
$6.4M
A wearable monitor for pediatric asthma: Developing environmental and breath sensors linked to spirometryU01EB022003 · NIBIB · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DAVIS, CRISTINA ELIZABETH, KENYON, NICHOLAS J. · 2015 to 2015
$1.5M
Using Breath Metabolites to Determine Specific Virus Infection in Asthmatic PatientsK23HL127185 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SCHIVO, MICHAEL · 2016 to 2018
$526k
NCATS NIH HHS UL1 TR000002NHLBI NIH HHS K23 HL127185NHLBI NIH HHS T32 HL007013NIBIB NIH HHS U01 EB022003NIEHS NIH HHS P30 ES023513NIH HHS UG3 OD023365NIH HHS UH3 OD023365
6 · The paper itself

Abstract

The human respiratory tract releases volatile metabolites into exhaled breath that can be utilized for noninvasive health diagnostics. To understand the origin of this metabolic process, our group has previously analyzed the headspace above human epithelial cell cultures using solid phase microextraction-gas chromatography-mass spectrometry (SPME-GC-MS). In the present work, we improve our model by employing sorbent-covered magnetic stir bars for headspace sorptive extraction (HSSE). Sorbent-coated stir bar analyte recovery increased by 52 times and captured 97 more compounds than SPME. Our data show that HSSE is preferred over liquid extraction via stir bar sorptive extraction (SBSE), which failed to distinguish volatiles unique to the cell samples compared against media controls. Two different cellular media were also compared, and we found that Opti-MEM® is preferred for volatile analysis. We optimized HSSE analytical parameters such as extraction time (24 h), desorption temperature (300 °C) and desorption time (7 min). Finally, we developed an internal standard for cell culture VOC studies by introducing 842 ng of deuterated decane per 5 mL of cell medium to account for error from extraction, desorption, chromatography and detection. This improved model will serve as a platform for future metabolic cell culture studies to examine changes in epithelial VOCs caused by perturbations such as viral or bacterial infections, opening opportunities for improved, noninvasive pulmonary diagnostics.

Indexed as

Cell LineEpithelial CellsGas Chromatography-Mass SpectrometryHumansRespiratory MucosaSolid Phase MicroextractionVolatile Organic CompoundsVolatile Organic Compounds

Identifiers

PMID29783172
PMCPMC5978767
OpenAlexW2800707383

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.