Evidence map›Paper›PMID 29782554›Full record

ArticlePLoS pathogens2018

Hijacking of multiple phospholipid biosynthetic pathways and induction of membrane biogenesis by a picornaviral 3CD protein.

Sravani Banerjee, David Aponte-Diaz, Calvin Yeager, Suresh D Sharma, Gang Ning, Hyung S Oh, Qingxia Han, Masato Umeda, Yuji Hara, Robert Y L Wang and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  6. Non-lytic spread of poliovirus requires the nonstructural protein 3CD.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Sravani BanerjeeDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, United States of America.
David Aponte-DiazDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, United States of America.ORCID 0000-0002-6023-2036
Calvin YeagerDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, United States of America.ORCID 0000-0001-6586-3243
Suresh D SharmaDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, United States of America.ORCID 0000-0002-8633-4145
Gang NingHuck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania, United States of America.
Hyung S OhDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, United States of America.
Qingxia HanDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, United States of America.ORCID 0000-0002-4364-6755
Masato UmedaDepartment of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Kyoto, Japan.
Yuji HaraDepartment of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Kyoto, Japan.
Robert Y L WangDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Craig E CameronDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, United States of America.ORCID 0000-0002-7564-5642
Pennsylvania State University · USKyoto University · JPChang Gung University · TW

Funding

Picornavirus Genome ReplicationR01AI053531 · NIAID · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI CAMERON, CRAIG E. · 2003 to 2017
$5.7M
Picornavirus Genome ReplicationR37AI053531 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CRAIG E. CAMERON · 2018 to 2026
$4.8M
Picornavirus Genome ReplicationR56AI053531 · NIAID · PENNSYLVANIA STATE UNIVERSITY, THE · PI CAMERON, CRAIG E. · 2008 to 2008
$439k
NIAID NIH HHS R01 AI053531NIAID NIH HHS R37 AI053531NIAID NIH HHS R56 AI053531NIH HHS AI053531
6 · The paper itself

Abstract

RNA viruses induce specialized membranous structures for use in genome replication. These structures are often referred to as replication organelles (ROs). ROs exhibit distinct lipid composition relative to other cellular membranes. In many picornaviruses, phosphatidylinositol-4-phosphate (PI4P) is a marker of the RO. Studies to date indicate that the viral 3A protein hijacks a PI4 kinase to induce PI4P by a mechanism unrelated to the cellular pathway, which requires Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, GBF1, and ADP ribosylation factor 1, Arf1. Here we show that a picornaviral 3CD protein is sufficient to induce synthesis of not only PI4P but also phosphatidylinositol-4,5-bisphosphate (PIP2) and phosphatidylcholine (PC). Synthesis of PI4P requires GBF1 and Arf1. We identified 3CD derivatives: 3CDm and 3CmD, that we used to show that distinct domains of 3CD function upstream of GBF1 and downstream of Arf1 activation. These same 3CD derivatives still supported induction of PIP2 and PC, suggesting that pathways and corresponding mechanisms used to induce these phospholipids are distinct. Phospholipid induction by 3CD is localized to the perinuclear region of the cell, the outcome of which is the proliferation of membranes in this area of the cell. We conclude that a single viral protein can serve as a master regulator of cellular phospholipid and membrane biogenesis, likely by commandeering normal cellular pathways.

Indexed as

ADP-Ribosylation Factor 1Brefeldin ACell MembraneDactinomycinGolgi ApparatusGuanine Nucleotide Exchange FactorsHeLa CellsHumansMicroscopy, Electron, TransmissionOrganelle BiogenesisPeptide HydrolasesPhosphatidylinositol PhosphatesPhospholipidsPicornaviridaePoliovirusProtein Synthesis InhibitorsADP-Ribosylation Factor 1Brefeldin ADactinomycinGBF1 protein, humangolgicide AGuanine Nucleotide Exchange FactorsPeptide Hydrolasesphosphatidylinositol 4-phosphatePhosphatidylinositol PhosphatesPhospholipidsProtein Synthesis InhibitorsPyridinesQuinolinesViral Proteins

Identifiers

PMID29782554
PMCPMC5983871
OpenAlexW2767151826

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.