Evidence map›Paper›PMID 29782522›Full record

ArticlePLoS neglected tropical diseases2018

Molecular detection of Mycobacterium ulcerans in the environment and its relationship with Buruli ulcer occurrence in Zio and Yoto districts of maritime region in Togo.

Issaka Maman, Tchadjobo Tchacondo, Abiba Banla Kere, Marcus Beissner, Kossi Badziklou, Ekanao Tedihou, Edith Nyaku, Komi Amekuse, Franz Xaver Wiedemann, Damintoti Simplice Karou and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Systematic review: Global host range, case fatality and detection rates ofJournal of clinical tuberculosis and other mycobacterial diseases · 2024
    Review
  3. Review
  4. Variable Number Tandem Repeat Profiling ofFrontiers in microbiology · 2022
    Article
  5. Article
  6. Review
  7. DisseminatedThe American journal of tropical medicine and hygiene · 2019
    Article
  8. Buruli Ulcer: a Review of the Current Knowledge.Current tropical medicine reports · 2018
    Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Issaka MamanNational reference laboratory for Buruli ulcer disease in Togo, Institut national d'hygiène (INH), Lomé, Togo.ORCID 0000-0002-6465-5116
Tchadjobo TchacondoLaboratoire des sciences biomédicales et substances bioactives (LSBSB), Ecole supérieure des techniques biologiques et alimentaires (ESTBA), Université de Lomé, Lomé, Togo.
Abiba Banla KereNational reference laboratory for Buruli ulcer disease in Togo, Institut national d'hygiène (INH), Lomé, Togo.
Marcus BeissnerDepartment for infectious diseases and tropical medicine (DITM), Medical center of the University of Munich (LMU), Munich, Germany.
Kossi BadziklouNational reference laboratory for Buruli ulcer disease in Togo, Institut national d'hygiène (INH), Lomé, Togo.
Ekanao TedihouLaboratoire de défense des cultures -Laboratoire national de biosécurité, Institut togolais de recherche agronomique, ITRA, Lomé, Togo.
Edith NyakuLaboratoire de défense des cultures -Laboratoire national de biosécurité, Institut togolais de recherche agronomique, ITRA, Lomé, Togo.
Komi AmekuseGerman leprosy and tuberculosis relief association (DAHW-T), Togo office, Lomé, Togo.
Franz Xaver WiedemannGerman leprosy and tuberculosis relief association (DAHW-T), Togo office, Lomé, Togo.
Damintoti Simplice KarouLaboratoire des sciences biomédicales et substances bioactives (LSBSB), Ecole supérieure des techniques biologiques et alimentaires (ESTBA), Université de Lomé, Lomé, Togo.
Gisela BretzelDepartment for infectious diseases and tropical medicine (DITM), Medical center of the University of Munich (LMU), Munich, Germany.
Togolese Ministry of Health · TGInstitut Togolais de Recherche Agronomique · TGLudwig-Maximilians-Universität München · DENetherlands Leprosy Relief · NLUniversity of Lomé · TG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBuruli Ulcer (BU) is a neglected tropical skin infection caused by Mycobacterium ulcerans. Residence near aquatic areas has been identified as an important source of transmission of M. ulcerans with increased risk of contracting Buruli ulcer. However, the reservoir and the mode of transmission are not yet well known. The aim of this study was to identify the presence of M. ulcerans in the environment and its relationship with Buruli ulcer occurrence in Zio and Yoto districts of the maritime region in south Togo.

methodsA total of 219 environmental samples including soil (n = 119), water (n = 65), biofilms/plants (n = 29) and animals' feces (n = 6) were collected in 17 villages of Zio and Yoto districts of the maritime region in Togo. DNA of M. ulcerans including IS2404 and IS2606 insertions sequences and mycolactone ketoreductase-B gene (KR-B) was detected using real time PCR amplification (qPCR) technique. In parallel, clinical samples of patients were tested to establish a comparison of the genetic profile of M. ulcerans between the two types of samples. A calibration curve was generated for IS2404 from a synthetic gene of M. ulcerans Transposase pMUM001, the plasmid of virulence.

resultsIn the absence of inhibition of the qPCR, 6/219 (2.7%) samples were tested positive for M. ulcerans DNA containing three sequences (IS2404/IS2606/KR-B). Positive samples of M. ulcerans were consisting of biofilms/plants (3/29; 10.3%), water (1/65; 1.7%) and soil (2/119; 1.5%). Comparative analysis between DNA detected in environmental and clinical samples from BU patients showed the same genetic profile of M. ulcerans in the same environment. All these samples were collected in the environment of Haho and Zio rivers in the maritime region.

conclusionThis study confirms the presence of M. ulcerans in the environment of the Zio and Yoto districts of the maritime region of Togo. This may explain partially, the high rates of Buruli ulcer patients in this region. Also, water, plants and soil along the rivers could be possible reservoirs of the bacterium. Therefore, Haho and Zio rivers could be potential sources of infection with M. ulcerans in humans in these districts.

Indexed as

Environmental MicrobiologyAnimalsBacterial ProteinsBuruli UlcerDNA, BacterialDNA Transposable ElementsFecesHumansLivestockMycobacterium ulceransPlasmidsReal-Time Polymerase Chain ReactionRural PopulationSoil MicrobiologyTogoBacterial ProteinsDNA, BacterialDNA Transposable Elements

Identifiers

PMID29782522
PMCPMC5983864
OpenAlexW2803897076

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.