Evidence map›Paper›PMID 29780197›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2018

TRAFIC: Fiber Tract Classification Using Deep Learning.

Prince D Ngattai Lam, Gaetan Belhomme, Jessica Ferrall, Billie Patterson, Martin Styner, Juan C Prieto

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Diffusion MRI with Machine Learning.Imaging neuroscience (Cambridge, Mass.) · 2024
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  9. Review
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  14. Deep white matter analysis: fast, consistent tractography segmentation across populations and dMRI acquisitions.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Prince D Ngattai LamNIRAL, UNC, Chapel Hill, North Carolina, United States.
Gaetan BelhommeNIRAL, UNC, Chapel Hill, North Carolina, United States.
Jessica FerrallNIRAL, UNC, Chapel Hill, North Carolina, United States.
Billie PattersonNIRAL, UNC, Chapel Hill, North Carolina, United States.
Martin StynerNIRAL, UNC, Chapel Hill, North Carolina, United States.
Juan C PrietoNIRAL, UNC, Chapel Hill, North Carolina, United States.

Funding

Cellular and molecular mechanisms governing cortical surface area overgrowth in iPSC-derived neural cells from longitudinally characterized individuals with autismR01HD055741 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Joseph Piven · 2007 to 2026
$52.6M
Preclinical CoreU54HD079124 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BELGER, AYSENIL · 2013 to 2019
$8.0M
Developmental Brain Atlas Tools and Data Applied to Humans and MacaquesR01MH091645 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NIETHAMMER, MARC, STYNER, MARTIN ANDREAS · 2010 to 2014
$2.1M
NICHD NIH HHS R01 HD055741NICHD NIH HHS U54 HD079124NIMH NIH HHS R01 MH091645
6 · The paper itself

Abstract

We present TRAFIC, a fully automated tool for the labeling and classification of brain fiber tracts. TRAFIC classifies new fibers using a neural network trained using shape features computed from previously traced and manually corrected fiber tracts. It is independent from a DTI Atlas as it is applied to already traced fibers. This work is motivated by medical applications where the process of extracting fibers from a DTI atlas, or classifying fibers manually is time consuming and requires knowledge about brain anatomy. With this new approach we were able to classify traced fiber tracts obtaining encouraging results. In this report we will present in detail the methods used and the results achieved with our approach.

Indexed as

Classificationdeep learningdiffusionDTIDWIfibersneural networkstractography

Identifiers

PMID29780197
PMCPMC5956534

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.