Evidence map›Paper›PMID 29777716›Full record

ArticleNeuroscience letters2018

Probability of viral labeling of neural stem cells in vivo.

Gregory W Kirschen, Shaoyu Ge, Il Memming Park

Abstract read
In one paragraph

Article in Neuroscience letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Gregory W KirschenMedical Scientist Training Program (MSTP), Stony Brook School of Medicine, United States; Department of Neurobiology & Behavior, Stony Brook University, Stony Brook, NY, 11794, United States.
Shaoyu GeDepartment of Neurobiology & Behavior, Stony Brook University, Stony Brook, NY, 11794, United States.
Il Memming ParkDepartment of Neurobiology & Behavior, Stony Brook University, Stony Brook, NY, 11794, United States. Electronic address: memming.park@stonybrook.edu.

Funding

Circuitry mechanisms underlying new neuron development in adult and epileptic brainR01NS089770 · NINDS · STATE UNIVERSITY NEW YORK STONY BROOK · PI GE, SHAOYU, HSIEH, JENNY · 2015 to 2019
$1.8M
Studying enriched environment-induced hippocampal neurogenesis using virtual reality exposureF30MH110103 · NIMH · STATE UNIVERSITY NEW YORK STONY BROOK · PI KIRSCHEN, GREGORY WOHL · 2016 to 2018
$103k
NIMH NIH HHS F30 MH110103NINDS NIH HHS R01 NS089770
6 · The paper itself

Abstract

In the neuroscience field over the past several decades, viral vectors have become powerful gene delivery systems to study neural populations of interest. For neural stem cell (NSC) biology, such viruses are often used to birth-date and track NSCs over developmental time in lineage tracing experiments. Yet, the probability of successful infection of a given stem cell in vivo remains unknown. This information would be helpful to inform investigators interested in titrating their viruses to selectively target sparsely-populated clusters of cells in the nervous system. Here, we describe a novel approach to calculate the probability of successful viral infection of NSCs using experimentally-derived cell cluster data from our newly-developed method to sparsely label adult NSCs, and a simple statistical derivation. Others interested in precisely defining their viral infection efficiency can use this method for a variety of basic and translational studies.

Indexed as

Gene Transfer TechniquesLentivirusRetroviridaeAnimalsHippocampusNeural Stem CellsStaining and LabelingAdult neural stem cellClonal analysisLentivirusLineage tracingProbability estimationRetrovirus

Identifiers

PMID29777716
PMCPMC6078782

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.