Evidence map›Paper›PMID 29775289›Full record

ArticleChemical research in toxicology2018

Mass Spectral Detection of Diethoxyphospho-Tyrosine Adducts on Proteins from HEK293 Cells Using Monoclonal Antibody depY for Enrichment.

Seda Onder, Lawrence M Schopfer, Ozden Tacal, Thomas A Blake, Rudolph C Johnson, Oksana Lockridge

Open access · hybridAbstract read
In one paragraph

Article in Chemical research in toxicology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Organophosphorus Pesticides Promote Protein Cross-Linking.Chemical research in toxicology · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Seda OnderDepartment of Biochemistry, School of Pharmacy , Hacettepe University , Ankara 06100 , Turkey.
Lawrence M SchopferEppley Institute , University of Nebraska Medical Center , Omaha , Nebraska 68198 , United States.
Ozden TacalDepartment of Biochemistry, School of Pharmacy , Hacettepe University , Ankara 06100 , Turkey.
Thomas A BlakeDivision of Laboratory Sciences, National Center for Environmental Health , Centers for Disease Control and Prevention , 4770 Buford Highway NE , Atlanta , Georgia 30341 , United States.
Rudolph C JohnsonDivision of Laboratory Sciences, National Center for Environmental Health , Centers for Disease Control and Prevention , 4770 Buford Highway NE , Atlanta , Georgia 30341 , United States.
Oksana LockridgeEppley Institute , University of Nebraska Medical Center , Omaha , Nebraska 68198 , United States.ORCID 0000-0002-8345-3640
University of Nebraska Medical Center · USCenters for Disease Control and Prevention · USHacettepe University · TR

Funding

UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Apar Kishor Ganti · 1985 to 2026
$55.0M
NCI NIH HHS P30 CA036727
6 · The paper itself

Abstract

Chronic illness from exposure to organophosphorus toxicants is hypothesized to involve modification of unknown proteins. Tyrosine in proteins that have no active site serine readily reacts with organophosphorus toxicants. We developed a monoclonal antibody, depY, that specifically recognizes diethoxyphospho-tyrosine in proteins and peptides, independent of the surrounding amino acid sequence. Our goal in the current study was to identify diethoxyphosphorylated proteins in human HEK293 cell lysate treated with chlorpyrifos oxon. Cell lysates treated with chlorpyrifos oxon were recognized by depY antibody in ELISA and capillary electrophoresis based Western blot. Tryptic peptides were analyzed by liquid chromatography tandem mass spectrometry. Liquid chromatography tandem mass spectrometry identified 116 diethoxyphospho-tyrosine peptides from 73 proteins in immunopurified samples, but found only 15 diethoxyphospho-tyrosine peptides from 12 proteins when the same sample was not immunopurified on depY. The most abundant proteins in the cell lysate, histone H4, heat shock 70 kDa protein 1A/1B, heat shock protein HSP 90 β, and α-enolase, were represented by several diethoxyphospho-tyrosine peptides. It was concluded that use of immobilized depY improved the number of diethoxyphospho-tyrosine peptides identified in a complex mixture. The mass spectrometry results confirmed the specificity of depY for diethoxyphospho-tyrosine peptides independent of the context of the modified tyrosine, which means depY could be used to analyze modified proteins in any species. Use of the depY antibody could lead to an understanding of chronic illness from organophosphorus pesticide exposure.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalBlotting, WesternChlorpyrifosChromatography, LiquidEnzyme-Linked Immunosorbent AssayHEK293 CellsHumansMiceMolecular StructurePeptidesProteinsProteolysisTandem Mass SpectrometryTyrosineAntibodies, MonoclonalChlorpyrifosO,O-diethyl O-3,5,6-trichloro-2-pyridyl phosphatePeptidesProteinsTyrosine

Identifiers

PMID29775289
PMCPMC6008731
OpenAlexW2803110620

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.