Evidence map›Paper›PMID 29774127›Full record

ArticleOncotarget2018

PAF1 complex interactions with SETDB1 mediate promoter H3K9 methylation and transcriptional repression of

James Ropa, Nirmalya Saha, Zhiling Chen, Justin Serio, Wei Chen, Dattatreya Mellacheruvu, Lili Zhao, Venkatesha Basrur, Alexey I Nesvizhskii, Andrew G Muntean

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The Roles of H3K9me3 Writers, Readers, and Erasers in Cancer Immunotherapy.International journal of molecular sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. MEIS1 and its potential as a cancer therapeutic target (Review).International journal of molecular medicine · 2021
    Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
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  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

James RopaDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
Nirmalya SahaDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
Zhiling ChenDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
Justin SerioDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
Wei ChenDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
Dattatreya MellacheruvuDepartment of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan, USA.
Lili ZhaoDepartment of Biostatistics, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Venkatesha BasrurDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
Alexey I NesvizhskiiDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
Andrew G MunteanDepartment of Pathology and The University of Michigan Medical School, Ann Arbor, Michigan, USA.
University of Michigan–Ann Arbor · US

Funding

COMPUTATIONAL TOOLS FOR MASS SPECTROMETRY-BASED INTERACTOME DATAR01GM094231 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Alexey I Nesvizhskii · 2010 to 2026
$5.4M
University of Michigan Proteogenomics Data Analysis CenterU24CA210967 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M, DHANASEKARAN, SARAVANA M · 2016 to 2020
$4.1M
Proteogenomics of Cancer Training ProgramT32CA140044 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAO, ARVIND, SARTOR, MAUREEN AGNES · 2010 to 2024
$3.9M
Post-translational regulation of MLL in leukemogenesisR00CA158136 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MUNTEAN, ANDREW GEORGE · 2012 to 2014
$670k
NCI NIH HHS R00 CA158136NCI NIH HHS T32 CA140044NCI NIH HHS U24 CA210967NIGMS NIH HHS R01 GM094231
6 · The paper itself

Abstract

The Polymerase Associated Factor 1 complex (PAF1c) is an epigenetic co-modifying complex that directly contacts RNA polymerase II (RNAPII) and several epigenetic regulating proteins. Mutations, overexpression and loss of expression of subunits of the PAF1c are observed in various forms of cancer suggesting proper regulation is needed for cellular development. However, the biochemical interactions with the PAF1c that allow dynamic gene regulation are unclear. We and others have shown that the PAF1c makes a direct interaction with MLL fusion proteins, which are potent oncogenic drivers of acute myeloid leukemia (AML). This interaction is critical for the maintenance of

Indexed as

H3K9 methyltransferaseleukemiapolymerase associated factor complexprotein-protein interactiontranscription

Identifiers

PMID29774127
PMCPMC5955148
OpenAlexW2802226249

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.