Evidence map›Paper›PMID 29773874›Full record

ArticleNature communications2018

Mutations in six nephrosis genes delineate a pathogenic pathway amenable to treatment.

Shazia Ashraf, Hiroki Kudo, Jia Rao, Atsuo Kikuchi, Eugen Widmeier, Jennifer A Lawson, Weizhen Tan, Tobias Hermle, Jillian K Warejko, Shirlee Shril and 55 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed, 1 pooled it
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 1 synthesis or guideline pooled it, 121 citations in OpenAlex.

  1. Pooled it
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  8. Article
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  12. The Life of a Kidney Podocyte.Acta physiologica (Oxford, England) · 2025
    Review
  13. Review
  14. Article
  15. Article
  16. Mechanisms of podocyte injury in genetic kidney disease.Pediatric nephrology (Berlin, Germany) · 2025
    Review
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  18. Review
  19. Review
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

65 authors at 20 institutions in 14 countries.

Shazia AshrafDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Hiroki KudoDepartment of Pediatrics, Tohoku University School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi, 980-8574, Japan.
Jia RaoDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Atsuo KikuchiDepartment of Pediatrics, Tohoku University School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi, 980-8574, Japan.ORCID http://orcid.org/0000-0003-1002-8739
Eugen WidmeierDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Jennifer A LawsonDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Weizhen TanDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Tobias HermleDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Jillian K WarejkoDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Shirlee ShrilDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Merlin AirikDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Tilman Jobst-SchwanDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Svjetlana LovricDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Daniela A BraunDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Heon Yung GeeDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8741-6177
David SchapiroDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Amar J MajmundarDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Carolin E SadowskiDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Werner L PabstDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Ankana DagaDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Amelie T van der VenDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Johanna M SchmidtDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Boon Chuan LowDepartment of Biological Sciences, National University of Singapore, Singapore, Singapore.
Anjali Bansal GuptaMechanobiology Institute, National University of Singapore, Singapore, Singapore.
Brajendra K TripathiLaboratory of Cellular Oncology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Jenny WongDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kirk CampbellDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kay MetcalfeManchester Centre for Genomic Medicine, St Mary's Hospital, Central Manchester University Hospitals NHS Foundation Trust, Manchester Academic Health Science Centre, Manchester, UK.
Denny SchanzeInstitute of Human Genetics, University Hospital Magdeburg, Magdeburg, Germany.ORCID http://orcid.org/0000-0003-2748-9929
Tetsuya NiihoriDepartment of Medical Genetics, Tohoku University School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi, 980-8574, Japan.
Hiroshi KaitoDepartment of Pediatrics, Kobe University Graduate School of Medicine, 7-5-2 Kusunoki-cho, Chuo-ku, Kobe, 650-0017, Japan.
Kandai NozuDepartment of Pediatrics, Kobe University Graduate School of Medicine, 7-5-2 Kusunoki-cho, Chuo-ku, Kobe, 650-0017, Japan.
Hiroyasu Tsukaguchi2nd Department of Internal Medicine, Kansai Medical University, 2-3-1 Shin-machi, Hirakata-shi, Osaka, 573-1191, Japan.
Ryojiro TanakaDepartment of Nephrology, Hyogo Prefectural Kobe Children's Hospital, 1-6-7 Minatojima-minamimachi, Chuo-ku, Kobe, Hyogo, 650-0047, Japan.ORCID http://orcid.org/0000-0002-7924-6876
Kiyoshi HamahiraDepartment of Pediatrics, Himeji Red Cross Hospital, 1-12-1 Shimoteno, Himeji, Hyogo, 670-8540, Japan.
Yasuko KobayashiDepartment of Pediatrics, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma, 371-8511, Japan.
Takumi TakizawaDepartment of Pediatrics, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma, 371-8511, Japan.
Ryo FunayamaDivision of Cell Proliferation, United Centers for Advanced Research and Translational Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, 980-8575, Japan.
Keiko NakayamaDivision of Cell Proliferation, United Centers for Advanced Research and Translational Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, 980-8575, Japan.
Yoko AokiDepartment of Medical Genetics, Tohoku University School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi, 980-8574, Japan.
Naonori KumagaiDepartment of Pediatrics, Tohoku University School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi, 980-8574, Japan.
Kazumoto IijimaDepartment of Pediatrics, Kobe University Graduate School of Medicine, 7-5-2 Kusunoki-cho, Chuo-ku, Kobe, 650-0017, Japan.
Henry FehrenbachDepartment of Pediatric Nephrology, Children's Hospital, Memmingen, Germany.
Jameela A KariPediatric Nephrology Center of Excellence and Pediatric Department, King Abdulaziz University, Jeddah, Saudi Arabia.
Sherif El DesokyPediatric Nephrology Center of Excellence and Pediatric Department, King Abdulaziz University, Jeddah, Saudi Arabia.
Sawsan JalalahPathology Department, King Abdulaziz University, Jeddah, Saudi Arabia.
Radovan BogdanovicInstitute for Mother and Child Health Care of Serbia "Dr Vukan Čupić", Department of Nephrology, University of Belgrade, Faculty of Medicine, Belgrade, 11000, Serbia.
Nataša StajićInstitute for Mother and Child Health Care of Serbia "Dr Vukan Čupić", Department of Nephrology, University of Belgrade, Faculty of Medicine, Belgrade, 11000, Serbia.
Hildegard ZappelDepartment for Paediatrics II, University of Göttingen, Göttingen, Germany.
Assel RakhmetovaDepartment of Nephrology, Asfendiyarov Kazakh National Medical University, Almaty, Kazakhstan.
Sharon-Rose WassmerDepartment of Nephrology, Luzerner Kantonsspital, Lucerne, Switzerland.
Therese JungraithmayrDepartment of Pediatrics, University Medical Center Innsbruck, Innsbruck, Austria.
Juergen StrehlauDepartment of Pediatric Nephrology, Hannover Medical School, Hannover, Germany.
Aravind Selvin KumarDepartment of Pediatric Nephrology and Medical Genetics, Institute of Child Health and Hospital for Children, TN Dr.M.G.R. Medical University, Chennai, India.
Arvind BaggaDivision of Pediatric Nephrology, Department of Pediatrics, All India Institute of Medical Sciences, New Delhi, India.
Neveen A SolimanDepartment of Pediatrics, Center of Pediatric Nephrology & Transplantation, Kasr Al Ainy School of Medicine, Cairo University, Cairo, Egypt.
Shrikant M ManeDepartment of Genetics, Yale University School of Medicine, New Haven, CT, 06510, USA.
Lewis KaufmanDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Douglas R LowyLaboratory of Cellular Oncology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Mohamad A JairajpuriDepartment of Biosciences, Jamia Millia Islamia, New Delhi, India.
Richard P LiftonDepartment of Genetics, Yale University School of Medicine, New Haven, CT, 06510, USA.
York PeiDivision of Nephrology, University Health Network, and University of Toronto, Toronto, ON, Canada.
Martin ZenkerInstitute of Human Genetics, University Hospital Magdeburg, Magdeburg, Germany.
Shigeo KureDepartment of Pediatrics, Tohoku University School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi, 980-8574, Japan. kure@med.tohoku.ac.jp.
Friedhelm HildebrandtDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA. friedhelm.hildebrandt@childrens.harvard.edu.ORCID http://orcid.org/0000-0002-7130-0030
Boston Children's Hospital · USTohoku University · JPIcahn School of Medicine at Mount Sinai · USKing Abdulaziz University · SAKobe University · JPGunma University · JPNational Institutes of Health · USNational University of Singapore · SGUniversity Hospital Magdeburg · DEUniversity of Belgrade · RSYale University · USAll India Institute of Medical Sciences · INCairo University · EGHimeji Red Cross Hospital · JPInnsbruck Medical University · ATJamia Millia Islamia · INKansai Medical University · JPKazakh National Medical University · KZKernkraftwerk Gundremmingen · DEKobe Children's Hospital · JP

Funding

Renal Physiology and Phenotyping CoreP30DK079310 · NIDDK · YALE UNIVERSITY · PI ARONSON, PETER S. · 2008 to 2022
$16.8M
Tumor gene expression in vitro and in vivoZIABC008905 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LOWY, DOUGLAS R. · 2009 to 2025
$14.3M
RESEARCH TRAINING IN PEDIATRIC NEPHROLOGYT32DK007726 · NIDDK · CHILDREN'S HOSPITAL BOSTON · PI BRISCOE, DAVID M. · 1994 to 2023
$5.9M
Identification and function of new genes causing childhood nephrotic syndromeR01DK076683 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HILDEBRANDT, FRIEDHELM · 2007 to 2021
$5.3M
Mount Sinai Nephrology Research Training GrantT32DK007757 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CAMPBELL, KIRK N, HE, JOHN CIJIANG · 1998 to 2022
$3.8M
The role of dendrin in glomerular disease progressionR01DK103022 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CAMPBELL, KIRK N · 2015 to 2019
$1.9M
High Performance Computing Instrumentation for the Yale Center for Genome AnalysisS10OD030363 · OD · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2022 to 2022
$1.2M
High Performance Computing Instrumentation for the Yale Center for Genome AnalysiS10OD018521 · OD · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2015 to 2015
$890k
NIDDK NIH HHS P30 DK079310NIDDK NIH HHS R01 DK076683NIDDK NIH HHS R01 DK103022NIDDK NIH HHS T32 DK007726NIDDK NIH HHS T32 DK007757NIH HHS S10 OD018521NIH HHS S10 OD030363
6 · The paper itself

Abstract

No efficient treatment exists for nephrotic syndrome (NS), a frequent cause of chronic kidney disease. Here we show mutations in six different genes (MAGI2, TNS2, DLC1, CDK20, ITSN1, ITSN2) as causing NS in 17 families with partially treatment-sensitive NS (pTSNS). These proteins interact and we delineate their roles in Rho-like small GTPase (RLSG) activity, and demonstrate deficiency for mutants of pTSNS patients. We find that CDK20 regulates DLC1. Knockdown of MAGI2, DLC1, or CDK20 in cultured podocytes reduces migration rate. Treatment with dexamethasone abolishes RhoA activation by knockdown of DLC1 or CDK20 indicating that steroid treatment in patients with pTSNS and mutations in these genes is mediated by this RLSG module. Furthermore, we discover ITSN1 and ITSN2 as podocytic guanine nucleotide exchange factors for Cdc42. We generate Itsn2-L knockout mice that recapitulate the mild NS phenotype. We, thus, define a functional network of RhoA regulation, thereby revealing potential therapeutic targets.

Indexed as

AdultAnimalsChildChild, PreschoolDisease Models, AnimalDNA Mutational AnalysisDrug ResistanceExome SequencingFemaleGene Knockdown TechniquesGlucocorticoidsHEK293 CellsHigh-Throughput Nucleotide SequencingHumansInfantMaleGlucocorticoidsrhoA GTP-Binding ProteinRNA, Small Interfering

Identifiers

PMID29773874
PMCPMC5958119
OpenAlexW2803716386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.