Evidence map›Paper›PMID 29773836›Full record

ArticleScientific reports2018

Novel pathway of 3-hydroxyanthranilic acid formation in limazepine biosynthesis reveals evolutionary relation between phenazines and pyrrolobenzodiazepines.

Magdalena Pavlikova, Zdenek Kamenik, Jiri Janata, Stanislav Kadlcik, Marek Kuzma, Lucie Najmanova

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. MarineMarine drugs · 2024
    Review
  5. Article
  6. Article
  7. Influence of Amino Acid Feeding on Production of Calcimycin and Analogs inInternational journal of environmental research and public health · 2021
    Article
  8. Article
  9. Article
  10. Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Magdalena PavlikovaInstitute of Microbiology of the Czech Academy of Sciences, 142 20, Prague 4, Czech Republic.
Zdenek KamenikInstitute of Microbiology of the Czech Academy of Sciences, 142 20, Prague 4, Czech Republic.
Jiri JanataInstitute of Microbiology of the Czech Academy of Sciences, 142 20, Prague 4, Czech Republic.
Stanislav KadlcikInstitute of Microbiology of the Czech Academy of Sciences, 142 20, Prague 4, Czech Republic.
Marek KuzmaInstitute of Microbiology of the Czech Academy of Sciences, 142 20, Prague 4, Czech Republic.
Lucie NajmanovaInstitute of Microbiology of the Czech Academy of Sciences, 142 20, Prague 4, Czech Republic. Lucie.Najmanova@biomed.cas.cz.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural pyrrolobenzodiazepines (PBDs) form a large and structurally diverse group of antitumour microbial metabolites produced through complex pathways, which are encoded within biosynthetic gene clusters. We sequenced the gene cluster of limazepines and proposed their biosynthetic pathway based on comparison with five available gene clusters for the biosynthesis of other PBDs. Furthermore, we tested two recombinant proteins from limazepine biosynthesis, Lim5 and Lim6, with the expected substrates in vitro. The reactions monitored by LC-MS revealed that limazepine biosynthesis involves a new way of 3-hydroxyanthranilic acid formation, which we refer to as the chorismate/DHHA pathway and which represents an alternative to the kynurenine pathway employed for the formation of the same precursor in the biosynthesis of other PBDs. The chorismate/DHHA pathway is presumably also involved in the biosynthesis of PBD tilivalline, several natural products unrelated to PBDs, and its part is shared also with phenazine biosynthesis. The similarities between limazepine and phenazine biosynthesis indicate tight evolutionary links between these groups of compounds.

Indexed as

3-Hydroxyanthranilic AcidBenzodiazepinesChromatography, LiquidEvolution, MolecularMass SpectrometryMetabolic Networks and PathwaysSequence Analysis, ProteinStreptomyces3-Hydroxyanthranilic AcidBenzodiazepines

Identifiers

PMID29773836
PMCPMC5958127

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.