Evidence map›Paper›PMID 29773820›Full record

ArticleScientific reports2018

Genetic diversity of PRRSV 1 in Central Eastern Europe in 1994-2014: origin and evolution of the virus in the region.

Gyula Balka, Katarzyna Podgórska, Manreetpal Singh Brar, Ádám Bálint, Daniel Cadar, Vladimir Celer, Lilla Dénes, Zuzana Dirbakova, Anna Jedryczko, Lázár Márton and 7 more

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
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  9. EAVLD 2024 - 7Italian journal of food safety · 2024
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. The scene of lung pathology during PRRSV-1 infection.Frontiers in veterinary science · 2024
    Review
  19. Article
  20. Eradication of PRRS from Hungarian Pig Herds between 2014 and 2022.Animals : an open access journal from MDPI · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Gyula BalkaDepartment of Pathology, University of Veterinary Medicine, István Str. 2, H-1076, Budapest, Hungary. balka.gyula@univet.hu.
Katarzyna PodgórskaNational Veterinary Research Institute, Partyzantów 57, 24-100, Pulawy, Poland.
Manreetpal Singh BrarThe University of Hong Kong, 5N-12, Kadoorie Biological Science Building, Hong Kong, China.
Ádám BálintNational Food Chain Safety Office Veterinary Diagnostic Directorate, Tábornok Str. 2, H-1149, Budapest, Hungary.
Daniel CadarArbovirology, Bernhard Nocht Institute for Tropical Medicine, WHO Collaborating Centre for Arbovirus and Haemorrhagic Fever Reference and Research National Reference Centre for Tropical Infectious Diseases, Bernhard Nocht Strasse 74, 20359, Hamburg, Germany.
Vladimir CelerFaculty of Veterinary Medicine, Institute of Infectious Diseases and Microbiology, University of Veterinary and Pharmaceutical Sciences Brno, 612 42, Brno, Czech Republic.
Lilla DénesDepartment of Pathology, University of Veterinary Medicine, István Str. 2, H-1076, Budapest, Hungary.ORCID 0000-0003-0069-4914
Zuzana DirbakovaVeterinary Institute Zvolen, Pod Drahami 918, 960 86, Zvolen, Slovak Republic.
Anna JedryczkoVeterinary Diagnostic Laboratory, Ostródzka, 11-036, Gietrzwałd, Poland.
Lázár MártonNational Food Chain Safety Office Animal Health and Animal Welfare Directorate, Keleti Károly Str. 24, H-1024, Budapest, Hungary.
Dinko NovoselUniversity of Zagreb, Faculty of Agriculture, Department of Animal Science, Svetošimunska cesta 25, 10000, Zagreb, Croatia.
Tamaš PetrovićScientific Veterinary Institute ''Novi Sad" Rumenački put 20, 21000, Novi Sad, Serbia.ORCID 0000-0002-9164-3356
Ivo SirakovDepartment of Medical Microbiology, Faculty of Medicine, Medical University of Sofia, Zdrave Str. 2, 1431, Sofia, Bulgaria.
Dóra SzalayNational Food Chain Safety Office Veterinary Diagnostic Directorate, Tábornok Str. 2, H-1149, Budapest, Hungary.
Ivan ToplakUniversity of Ljubljana, Veterinary Faculty, National Veterinary Institute Gerbičeva, 60, 1000, Ljubljana, Slovenia.
Frederick Chi-Ching LeungThe University of Hong Kong, 5N-12, Kadoorie Biological Science Building, Hong Kong, China.
Tomasz StadejekDepartment of Pathology and Veterinary Diagnostics, Faculty of Veterinary Medicine, Warsaw University of Life Sciences - SGGW, ul. Nowoursynowska 159c, 02-776, Warsaw, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

More than 20 years after the first outbreaks, the phylogenetic picture of PRRSV is still incomplete and full of gaps, especially in regards of PRRSV 1. Due to the exceptional diversity observed at the eastern borders of Europe and the low number of available sequences from Central Eastern European countries, the authors collected and analyzed both recent as well as already submitted sequences comparing them to a large backbone set of available ORF5 sequences representing the full spectrum of PRRSV 1 Subtype 1 diversity to conduct a systematic phylogenetic analysis and reclassification elucidating the diversity of the virus in these countries. Moreover, further analyses of the EUROSTAT data regarding the live pig movement trends revealed their influence of virus diversity and evolution. The results indicate that besides the effect of local, isolated divergent evolution and the use of modified live vaccines, the most important factor influencing a given country's virus diversity is the transboundary movement of live, infected animals.

Indexed as

DNA, ViralEurope, EasternEvolution, MolecularGenetic VariationPhylogenyPhylogeographyPorcine respiratory and reproductive syndrome virusDNA, Viral

Identifiers

PMID29773820
PMCPMC5958080

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.