Evidence map›Paper›PMID 29771956›Full record

ArticlePloS one2018

Molecular survey of basidiomycetes and divergence time estimation: An Indian perspective.

Meghna Bhatt, Pankti Mistri, Ishita Joshi, Hemal Ram, Rinni Raval, Sruthi Thoota, Ankur Patel, Dhrupa Raval, Poonam Bhargava, Subhash Soni and 2 more

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Characterization of the complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Meghna BhattGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Pankti MistriGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Ishita JoshiGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Hemal RamGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Rinni RavalGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Sruthi ThootaGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Ankur PatelGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Dhrupa RavalGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Poonam BhargavaGujarat Biotechnology Research Center, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Subhash SoniGujarat Biotechnology Research Center, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Snehal BagathariaGujarat State Biotechnology Mission, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.
Madhvi JoshiGujarat Biotechnology Research Center, Department of Science & Technology, Government of Gujarat, Gandhinagar, Gujarat, India.ORCID 0000-0003-4102-7114

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study outlines the biodiversity of mushrooms of India. It reveals the molecular biodiversity and divergence time estimation of basidiomycetes from Gujarat, India. A total of 267 mushrooms were collected from 10 locations across the state. 225 ITS sequences were generated belonging to 105 species, 59 genera and 29 families. Phylogenetic analysis of Agaricaceae reveals monophyletic clade of Podaxis differentiating it from Coprinus. Further, the ancient nature of Podaxis supports the hypothesis that gasteroid forms evolved from secotioid forms. Members of Polyporaceae appeared polyphyletic. Further, our results of a close phylogenetic relationship between Trametes and Lenziteslead us to propose that the genera Trametes may by enlarged to include Lenzites. The tricholomatoid clade shows a clear demarcation for Entolomataceae. However, Lyophyllaceae and Tricholomataceae could not be distinguished clearly. Distribution studies of the mushrooms showed omnipresence of Ganoderma and Schizophyllum. Further, divergence time estimation shows that Dacrymycetes evolved in the Neoproterozoic Era and Hymenochaetales diverged from Agaricomycetes during the Silurian period.

Indexed as

BiodiversityEvolution, MolecularAgaricalesBayes TheoremDNA, FungalIndiaModels, GeneticPhylogenySequence Analysis, DNATime FactorsDNA, Fungal

Identifiers

PMID29771956
PMCPMC5957343

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.