Evidence map›Paper›PMID 29771498›Full record

ArticleJournal of the American Chemical Society2018

Structure and Function of the Transmembrane Domain of NsaS, an Antibiotic Sensing Histidine Kinase in Staphylococcus aureus.

Manasi P Bhate, Thomas Lemmin, Georg Kuenze, Bruk Mensa, Soumya Ganguly, Jason M Peters, Nathan Schmidt, Jeffrey G Pelton, Carol A Gross, Jens Meiler and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Construction of a linezolid-resistant strain of methicillin-susceptibleFrontiers in cellular and infection microbiology · 2026
    Article
  2. Review
  3. ACS chemical biology · 2022
    Article
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  5. Article
  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Manasi P BhateDepartment of Pharmaceutical Chemistry , UC San Francisco , San Francisco , California 94158 , United States.
Thomas LemminDepartment of Pharmaceutical Chemistry , UC San Francisco , San Francisco , California 94158 , United States.
Georg KuenzeDepartment of Chemistry, Center for Structural Biology , Vanderbilt University , 465 21st Avenue South , Nashville , Tennessee 37203 , United States.
Bruk MensaDepartment of Pharmaceutical Chemistry , UC San Francisco , San Francisco , California 94158 , United States.
Soumya GangulyDepartment of Chemistry, Center for Structural Biology , Vanderbilt University , 465 21st Avenue South , Nashville , Tennessee 37203 , United States.
Jason M PetersDepartment of Microbiology and Immunology , UC San Francisco , San Francisco , California 94158 , United States.
Nathan SchmidtDepartment of Pharmaceutical Chemistry , UC San Francisco , San Francisco , California 94158 , United States.
Jeffrey G PeltonQB3 Institute , UC Berkeley , Berkeley , California 94720 , United States.
Carol A GrossDepartment of Pharmaceutical Chemistry , UC San Francisco , San Francisco , California 94158 , United States.
Jens MeilerDepartment of Chemistry, Center for Structural Biology , Vanderbilt University , 465 21st Avenue South , Nashville , Tennessee 37203 , United States.
William F DeGradoDepartment of Pharmaceutical Chemistry , UC San Francisco , San Francisco , California 94158 , United States.ORCID 0000-0003-4745-263X
University of California, San Francisco · USVanderbilt University · USUniversity of California, Berkeley · US

Funding

Cellular homeostasis pathways in bacteriaR35GM118061 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GROSS, CAROL ANNE · 2016 to 2025
$9.0M
RESEARCH TRAINING IN CHEMISTRY AND CHEMICAL BIOLOGYT32GM064337 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2002 to 2021
$7.8M
Deciphering the relationship between structure, dynamics and function in helical bundle proteinsR35GM122603 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WILLIAM DEGRADO · 2017 to 2026
$7.1M
Proposal for Central California 900 MHZ NMR SpectrometerP41GM068933 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI WEMMER, DAVID E · 2003 to 2007
$5.9M
De novo design of alpha-helical bundlesR37GM054616 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 2004 to 2013
$3.6M
A Multiscale Model of Protein Mediated Changes in membrane MorphologyR01GM117593 · NIGMS · COLORADO STATE UNIVERSITY · PI ZHOU, YONGCHENG · 2015 to 2019
$1.8M
GPU-Accelerated Parallel Computer for Drug Discovery ApplicationsS10OD020154 · OD · VANDERBILT UNIVERSITY · PI SMITH, JARROD ANSON · 2015 to 2015
$225k
NIGMS NIH HHS P41 GM068933NIGMS NIH HHS R01 GM117593NIGMS NIH HHS R35 GM118061NIGMS NIH HHS R35 GM122603NIGMS NIH HHS R37 GM054616NIGMS NIH HHS T32 GM064337
6 · The paper itself

Abstract

NsaS is one of four intramembrane histidine kinases (HKs) in Staphylococcus aureus that mediate the pathogen's response to membrane active antimicrobials and human innate immunity. We describe the first integrative structural study of NsaS using a combination of solution state NMR spectroscopy, chemical-cross-linking, molecular modeling and dynamics. Three key structural features emerge: First, NsaS has a short N-terminal amphiphilic helix that anchors its transmembrane (TM) bundle into the inner leaflet of the membrane such that it might sense neighboring proteins or membrane deformations. Second, the transmembrane domain of NsaS is a 4-helix bundle with significant dynamics and structural deformations at the membrane interface. Third, the intracellular linker connecting the TM domain to the cytoplasmic catalytic domains of NsaS is a marginally stable helical dimer, with one state likely to be a coiled-coil. Data from chemical shifts, heteronuclear NOE, H/D exchange measurements and molecular modeling suggest that this linker might adopt different conformations during antibiotic induced signaling.

Indexed as

Anti-Bacterial AgentsBacitracinBacterial ProteinsGene Knockout TechniquesHistidine KinaseHydrophobic and Hydrophilic InteractionsMagnetic Resonance SpectroscopyMembrane ProteinsMicrobial Sensitivity TestsMolecular Dynamics SimulationNisinProtein Conformation, alpha-HelicalProtein DomainsStaphylococcus aureusAnti-Bacterial AgentsBacitracinBacterial ProteinsHistidine KinaseMembrane ProteinsNisin

Identifiers

PMID29771498
PMCPMC6499544
OpenAlexW2804276953

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.