Evidence map›Paper›PMID 29771307›Full record

ArticleHuman molecular genetics2018

Assessment of rosacea symptom severity by genome-wide association study and expression analysis highlights immuno-inflammatory and skin pigmentation genes.

Jennifer L Aponte, Mathias N Chiano, Laura M Yerges-Armstrong, David A Hinds, Chao Tian, Akanksha Gupta, Cong Guo, Dana J Fraser, Johannes M Freudenberg, Deepak K Rajpal and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 47 citations in OpenAlex.

  1. The exposomal imprint on rosacea: More than skin deep.Journal of the European Academy of Dermatology and Venereology : JEADV · 2026
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  6. Association ofZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2025
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  15. Regulation of MAPK Signaling Pathways by the Large HERC Ubiquitin Ligases.International journal of molecular sciences · 2023
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Effectiveness of VISIA system in evaluating the severity of rosacea.Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Jennifer L AponteGenomic Medicine, PAREXEL International, Research Triangle Park, NC, USA.
Mathias N ChianoTarget Sciences, GlaxoSmithKline, Stevenage, UK.
Laura M Yerges-ArmstrongTarget Sciences, GlaxoSmithKline, Collegeville, PA, USA.
David A Hinds23andMe Inc., Mountain View, CA, USA.
Chao Tian23andMe Inc., Mountain View, CA, USA.
Akanksha GuptaTranslational Science, Dermatology, GlaxoSmithKline, Research Triangle Park, NC, USA.
Cong GuoTarget Sciences, GlaxoSmithKline, Collegeville, PA, USA.
Dana J FraserGenomic Medicine, PAREXEL International, Research Triangle Park, NC, USA.
Johannes M FreudenbergTarget Sciences, GlaxoSmithKline, Collegeville, PA, USA.
Deepak K RajpalTarget Sciences, GlaxoSmithKline, Collegeville, PA, USA.
Margaret G EhmTarget Sciences, GlaxoSmithKline, Collegeville, PA, USA.
Dawn M WaterworthTarget Sciences, GlaxoSmithKline, Collegeville, PA, USA.
GlaxoSmithKline (United States) · US23andMe (United States) · USPAREXEL International (United States) · USTarget (United States) · USGlaxoSmithKline (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rosacea is a common, chronic skin disease of variable severity with limited treatment options. The cause of rosacea is unknown, but it is believed to be due to a combination of hereditary and environmental factors. Little is known about the genetics of the disease. We performed a genome-wide association study (GWAS) of rosacea symptom severity with data from 73 265 research participants of European ancestry from the 23andMe customer base. Seven loci had variants associated with rosacea at the genome-wide significance level (P < 5 × 10-8). Further analyses highlighted likely gene regions or effector genes including IRF4 (P = 1.5 × 10-17), a human leukocyte antigen (HLA) region flanked by PSMB9 and HLA-DMB (P = 2.2 × 10-15), HERC2-OCA2 (P = 4.2 × 10-12), SLC45A2 (P = 1.7 × 10-10), IL13 (P = 2.8 × 10-9), a region flanked by NRXN3 and DIO2 (P = 4.1 × 10-9), and a region flanked by OVOL1and SNX32 (P = 1.2 × 10-8). All associations with rosacea were novel except for the HLA locus. Two of these loci (HERC-OCA2 and SLC45A2) and another precedented variant (rs1805007 in melanocortin 1 receptor) with an association P value just below the significance threshold (P = 1.3 × 10-7) have been previously associated with skin phenotypes and pigmentation, two of these loci are linked to immuno-inflammation phenotypes (IL13 and PSMB9-HLA-DMA) and one has been associated with both categories (IRF4). Genes within three loci (PSMB9-HLA-DMA, HERC-OCA2 and NRX3-DIO2) were differentially expressed in a previously published clinical rosacea transcriptomics study that compared lesional to non-lesional samples. The identified loci provide specificity of inflammatory mechanisms in rosacea, and identify potential pathways for therapeutic intervention.

Indexed as

AdultCysteine EndopeptidasesFemaleGene Expression RegulationGenome-Wide Association StudyGuanine Nucleotide Exchange FactorsHLA-D AntigensHumansInterferon Regulatory Factor-4Interferon Regulatory FactorsInterleukin-13Linkage DisequilibriumMaleMiddle AgedPolymorphism, Single NucleotideRosaceaCysteine EndopeptidasesGuanine Nucleotide Exchange FactorsHERC2 protein, humanHLA-D AntigensHLA-DM antigensIL13 protein, humanInterferon Regulatory Factor-4Interferon Regulatory FactorsInterleukin-13LMP-2 proteinSNX33 protein, humanSorting NexinsUbiquitin-Protein Ligases

Identifiers

PMID29771307
PMCPMC6822543
OpenAlexW2807729922

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.