Evidence map›Paper›PMID 29771303›Full record

ArticleHuman molecular genetics2018

Visual impairment and progressive phthisis bulbi caused by recessive pathogenic variant in MARK3.

Muhammad Ansar, Hyunglok Chung, Yar M Waryah, Periklis Makrythanasis, Emilie Falconnet, Ali Raza Rao, Michel Guipponi, Ashok K Narsani, Ralph Fingerhut, Federico A Santoni and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

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  8. UsingDevelopment (Cambridge, England) · 2020
    Review
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  13. Carrier screening for recessive disorders.Nature reviews. Genetics · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Muhammad AnsarDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
Hyunglok ChungDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Yar M WaryahMolecular Biology and Genetics Department, Medical Research Center, Liaquat University of Medical and Health Sciences, Jamshoro, Pakistan.
Periklis MakrythanasisDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
Emilie FalconnetDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
Ali Raza RaoMolecular Biology and Genetics Department, Medical Research Center, Liaquat University of Medical and Health Sciences, Jamshoro, Pakistan.
Michel GuipponiDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
Ashok K NarsaniInstitute of Ophthalmology, Liaquat University of Medical and Health Sciences, Jamshoro, Pakistan.
Ralph FingerhutSwiss Newborn Screening Laboratory, University Children's Hospital, Zurich, Switzerland.
Federico A SantoniDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
Emmanuelle RanzaDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
Ali M WaryahMolecular Biology and Genetics Department, Medical Research Center, Liaquat University of Medical and Health Sciences, Jamshoro, Pakistan.
Hugo J BellenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Stylianos E AntonarakisDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
Liaquat University of Medical & Health Sciences · PKUniversity of Geneva · CHUniversity Hospital of Geneva · CHHoward Hughes Medical Institute · USTexas Children's Hospital · USUniversity Children's Hospital Zurich · CH

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN, NEUL, JEFFREY L · 2014 to 2019
$7.8M
Expansion and characterization of the Drosophila Toolkit to study SARS-CoV-2R24OD022005 · OD · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2016 to 2023
$7.4M
NICHD NIH HHS U54 HD083092NIH HHS P40 OD018537NIH HHS R24 OD022005
6 · The paper itself

Abstract

Developmental eye defects often severely reduce vision. Despite extensive efforts, for a substantial fraction of these cases the molecular causes are unknown. Recessive eye disorders are frequent in consanguineous populations and such large families with multiple affected individuals provide an opportunity to identify recessive causative genes. We studied a Pakistani consanguineous family with three affected individuals with congenital vision loss and progressive eye degeneration. The family was analyzed by exome sequencing of one affected individual and genotyping of all family members. We have identified a non-synonymous homozygous variant (NM_001128918.2: c.1708C > G: p.Arg570Gly) in the MARK3 gene as the likely cause of the phenotype. Given that MARK3 is highly conserved in flies (I: 55%; S: 67%) we knocked down the MARK3 homologue, par-1, in the eye during development. This leads to a significant reduction in eye size, a severe loss of photoreceptors and loss of vision based on electroretinogram (ERG) recordings. Expression of the par-1 p.Arg792Gly mutation (equivalent to the MARK3 variant found in patients) in developing fly eyes also induces loss of eye tissue and reduces the ERG signals. The data in flies and human indicate that the MARK3 variant corresponds to a loss of function. We conclude that the identified mutation in MARK3 establishes a new gene-disease link, since it likely causes structural abnormalities during eye development and visual impairment in humans, and that the function of MARK3/par-1 is evolutionarily conserved in eye development.

Indexed as

AnimalsAnimals, Genetically ModifiedConsanguinityDrosophila melanogasterDrosophila ProteinsExome SequencingEye AbnormalitiesEye DiseasesFemaleGenes, RecessiveGlycogen Synthase Kinase 3HumansMaleMutation, MissensePedigreeProtein Serine-Threonine KinasesDrosophila ProteinsGlycogen Synthase Kinase 3MARK3 protein, humanPar-1 protein, DrosophilaProtein Serine-Threonine Kinases

Identifiers

PMID29771303
PMCPMC6048992
OpenAlexW2803430166

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.