Evidence map›Paper›PMID 29770900›Full record

ArticleJournal of clinical immunology2018

Insights into Mutation Effect in Three Poikiloderma with Neutropenia Patients by Transcript Analysis and Disease Evolution of Reported Patients with the Same Pathogenic Variants.

Elisa A Colombo, Nursel H Elcioglu, Claudio Graziano, Pamela Farinelli, Elisabetta Di Fede, Iria Neri, Elena Facchini, Mariangela Greco, Cristina Gervasini, Lidia Larizza

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In one paragraph

Article in Journal of clinical immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Poikiloderma with neutropenia: a case report.Journal of medical case reports · 2025
    Article
  3. Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Elisa A ColomboDipartimento di Scienze della Salute, Università degli Studi di Milano, via Antonio di Rudinì 8, 20142, Milan, Italy. elisaadele.colombo@unimi.it.
Nursel H ElciogluDepartment of Pediatric Genetics, Marmara University Medical School, 34890, Istanbul, Turkey.
Claudio GrazianoU.O. Genetica Medica, Policlinico S. Orsola-Malpighi, Via Massarenti 9, 40138, Bologna, Italy.
Pamela FarinelliClinica Dermatologica, Azienda ospedaliero universitaria "Maggiore della Carità", Corso Giuseppe Mazzini 18, 28100, Novara, Italy.
Elisabetta Di FedeDipartimento di Scienze della Salute, Università degli Studi di Milano, via Antonio di Rudinì 8, 20142, Milan, Italy.
Iria NeriU.O. Dermatologia, Policlinico S. Orsola-Malpighi, Via Massarenti 9, 40138, Bologna, Italy.
Elena FacchiniU.O. Pediatria - Programma di Oncologia, Ematologia e Trapianto, Policlinico S. Orsola-Malpighi, Via Massarenti 9, 40138, Bologna, Italy.
Mariangela GrecoDivisione di Ematologia, Azienda Ospedaliero Universitaria "Maggiore della Carità", Corso Giuseppe Mazzini 18, 28100, Novara, Italy.
Cristina GervasiniDipartimento di Scienze della Salute, Università degli Studi di Milano, via Antonio di Rudinì 8, 20142, Milan, Italy.
Lidia LarizzaLaboratorio di Citogenetica Medica e Genetica Molecolare, Centro di Ricerche e Tecnologie Biomediche IRCCS-Istituto Auxologico Italiano, Via Ariosto 13, 20145, Milan, Italy.
Policlinico S.Orsola-Malpighi · ITUniversity of Milan · ITUniversità degli Studi del Piemonte Orientale “Amedeo Avogadro” · ITIRCCS Istituto Auxologico Italiano · ITMarmara University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposePoikiloderma with neutropenia (PN) is a genodermatosis currently described in 77 patients, all presenting with early-onset poikiloderma, neutropenia, and several additional signs. Biallelic loss-of-function mutations in USB1 gene are detected in all molecularly tested patients but genotype-phenotype correlation remains elusive. Cancer predisposition is recognized among PN features and pathogenic variants found in patients who developed early in life myelodysplasia (n = 12), acute myeloid leukemia (n = 2), and squamous cell carcinoma (n = 2) should be kept into account in management and follow-up of novel patients. This will hopefully allow achieving data clustered on specific mutations relevant to oncological surveillance of the carrier patients.

methodsWe describe the clinical features of three unreported PN patients and characterize their USB1 pathogenic variants by transcript analysis to get insights into the effect on the overall phenotype and disease evolution.

resultsA Turkish boy is homozygous for the c.531delA deletion, a recurrent mutation in Turkey; an adult Italian male is compound heterozygous for two nonsense mutations, c.243G>A and c.541C>T, while an Italian boy is homozygous for the splicing c.683_693+1del variant. The identified mutations have already been reported in PN patients who developed hematologic or skin cancer. Aberrant mRNAs of all four mutated alleles could be identified confirming that transcripts of USB1 main isoform either carrying stop codons or mis-spliced may at least partially escape nonsense-mediated decay.

conclusionsOur study addresses the need of gathering insights on genotype-phenotype correlations in newly described PN patients, by transcript analysis and information on disease evolution of reported patients with the same pathogenic variants.

Indexed as

Gene Expression RegulationGenetic Predisposition to DiseaseMutationTranscriptomeAdultAllelesBiomarkers, TumorBiopsyBone MarrowChildDisease ProgressionDNA Mutational AnalysisGenotypeHumansInfantMaleBiomarkers, Tumorcancer predispositiondisease phenotypePoikiloderma with neutropeniatranscript analysisUSB1

Identifiers

PMID29770900
OpenAlexW2803747460

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.