ArticleJournal of experimental botany2018
Genome-wide association reveals novel genomic loci controlling rice grain yield and its component traits under water-deficit stress during the reproductive stage.
Article in Journal of experimental botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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28 citing papers in PubMed.
- An Integrated Meta-QTL and Transcriptome Analysis Provides Candidate Genes Associated with Drought Tolerance in Rice Seedlings.Plants (Basel, Switzerland) · 2025Article
- Superior haplotypes of genes associated with higher grain yield under reproductive stage drought stress in rice.Journal of experimental botany · 2025Article
- Mapping of low-nitrogen tolerance genes in Japonica rice at seedling stage by genome-wide association study.Scientific reports · 2025Article
- Genome-wide association analysis in identification of superior haplotypes for vegetative stage drought stress tolerance in rice.Physiology and molecular biology of plants : an international journal of functional plant biology · 2025Article
- Natural variation in LONELY GUY-Like 1 regulates rice grain weight under warmer night conditions.Plant physiology · 2024Article
- Dissecting the Genetic Basis of Yield Traits and Validation of a Novel Quantitative Trait Locus for Grain Width and Weight in Rice.Plants (Basel, Switzerland) · 2024Article
- Uncovering the Genomic Regions Associated with Yield Maintenance in Rice Under Drought Stress Using an Integrated Meta-Analysis Approach.Rice (New York, N.Y.) · 2024Article
- Integrating genome-wide association studies with selective sweep reveals genetic loci associated with tolerance to low phosphate availability inMolecular breeding : new strategies in plant improvement · 2023Article
- Genetic Mapping of the Root Mycobiota in Rice and its Role in Drought Tolerance.Rice (New York, N.Y.) · 2023Article
- Identification of Drought Tolerant Rice (Plants (Basel, Switzerland) · 2023Article
- Genome-wide association mapping for yield-related traits in soybean (Glycine max) under well-watered and drought-stressed conditions.Frontiers in plant science · 2023Article
- Can biochemical traits bridge the gap between genomics and plant performance? A study in rice under drought.Plant physiology · 2022Article
- A high-resolution genome-wide association study of the grain ionome and agronomic traits in rice Oryza sativa subsp. indica.Scientific reports · 2021Article
- Article
- Genome-wide association study and Mendelian randomization analysis provide insights for improving rice yield potential.Scientific reports · 2021Article
- Genome-wide association study and gene network analyses reveal potential candidate genes for high night temperature tolerance in rice.Scientific reports · 2021Article
- Breeding Driven Enrichment of Genetic Variation for Key Yield Components and Grain Starch Content Under Drought Stress in Winter Wheat.Frontiers in plant science · 2021Article
- Emerging Molecular Strategies for Improving Rice Drought Tolerance.Current genomics · 2021Review
- Genome-wide association mapping revealed numerous novel genomic loci for grain nutritional and yield-related traits in rice (3 Biotech · 2020Article
- A Dual Strategy of Breeding for Drought Tolerance and Introducing Drought-Tolerant, Underutilized Crops into Production Systems to Enhance Their Resilience to Water Deficiency.Plants (Basel, Switzerland) · 2020Review
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5 authors.
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Abstract
A diversity panel comprising of 296 indica rice genotypes was phenotyped under non-stress and water-deficit stress conditions during the reproductive stage in the 2013 and 2014 dry seasons (DSs) at IRRI, Philippines. We investigated the genotypic variability for grain yield, yield components, and related traits, and conducted genome-wide association studies (GWAS) using high-density 45K single nucleotide polymorphisms. We detected 38 loci in 2013 and 64 loci in 2014 for non-stress conditions and 69 loci in 2013 and 55 loci in 2014 for water-deficit stress. Desynchronized flowering time confounded grain yield and its components under water-deficit stress in the 2013 experiment. Statistically corrected grain yield and yield component values using days to flowering helped to detect 31 additional genetic loci for grain yield, its components, and the harvest index in 2013. There were few overlaps in the detected loci between years and treatments, and when compared with previous studies using the same panel, indicating the complexity of yield formation under stress. Nevertheless, our analyses provided important insights into the potential links between grain yield with seed set and assimilate partitioning. Our findings demonstrate the complex genetic architecture of yield formation and we propose exploring the genetic basis of less complex component traits as an alternative route for further yield enhancement.
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